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putative_late_L1_protein
Euk-VirRhinolophus_ferrumequinum_papillomavirus_1
putative_late_L1_protein__YP_009507329__Rhinolophus_ferrumequinum_papillomavirus_1__1464074
Identity
- Accession:
- YP_009507329 ↗
- Protein ID:
- putative_late_L1_protein
- Kingdom:
- euk
Quality
83.8
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Treisdeltapapillomavirus›
Rhinolophus_ferrumequinum_papillomavirus_1
TaxID: 1464074
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-110_309-408_447-469
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 163.0 | 1.60e-47 | 49.5% | 20.3% |
| PF00500.25 | Late_protein_L1 | 153.8 | 1.00e-44 | 41.9% | 17.7% |
D2
high
residues 116-298
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 260.0 | 6.50e-77 | 100.0% | 36.2% |