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putative_leucine-rich_repeat_protein
Euk-VirAcanthamoeba_polyphaga_mimivirus
putative_leucine-rich_repeat_protein__YP_003986885__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003986885 ↗
- Protein ID:
- putative_leucine-rich_repeat_protein
- Kingdom:
- euk
Quality
75.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 198-316
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1h6uA02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.85 | 80.0 | 7.12e-01 | 100.0% | 80.9% |
| 1gwbA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.84 | 79.0 | 5.92e-01 | 100.0% | 53.2% |
| 1jl5A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.84 | 79.0 | 5.45e-01 | 100.0% | 34.8% |
| 5irlA02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.83 | 78.0 | 5.60e-01 | 100.0% | 53.4% |
| 4gt6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.73 | 66.0 | 4.62e-01 | 99.2% | 35.6% |
| 3bh7B01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.68 | 61.0 | 5.21e-01 | 100.0% | 74.1% |
| 3w4sA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.58 | 48.0 | 3.68e-01 | 89.9% | 67.8% |
| 3bf5A01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 45.0 | 3.63e-01 | 91.6% | 65.1% |
| 6ilsA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 47.0 | 3.49e-01 | 100.0% | 69.6% |
| 2c4eA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 47.0 | 3.52e-01 | 100.0% | 66.9% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3378788 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.88 | 83.0 | 6.61e-01 | 100.0% | 64.1% |
| 3831490 | 207.1.1.174 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_3 | 0.86 | 82.0 | 6.04e-01 | 100.0% | 49.8% |
| 3832080 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.86 | 81.0 | 4.99e-01 | 100.0% | 23.4% |
| 3638939 | 207.1.1.132 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_6, LRR_8 | 0.85 | 81.0 | 5.08e-01 | 100.0% | 24.5% |
| 3456751 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.85 | 80.0 | 5.67e-01 | 100.0% | 46.4% |
| 3645080 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.85 | 80.0 | 7.03e-01 | 100.0% | 86.3% |
| 3526782 | 207.1.1.240 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRR_4, LRR_6, LRR_8 | 0.85 | 80.0 | 5.73e-01 | 100.0% | 43.8% |
| 3411353 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.85 | 81.0 | 5.39e-01 | 100.0% | 32.0% |
| 4427480 | 207.1.1.149 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4, LRR_9 | 0.85 | 80.0 | 5.82e-01 | 100.0% | 47.5% |
| 4868010 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.85 | 80.0 | 4.86e-01 | 100.0% | 21.6% |
| 3893295 | 207.1.1.137 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_8 | 0.85 | 80.0 | 6.45e-01 | 100.0% | 65.2% |
| 3383785 | 207.1.1.99 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At5g56370 | 0.85 | 79.0 | 5.31e-01 | 100.0% | 33.9% |
| 3194455 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.84 | 79.0 | 5.13e-01 | 100.0% | 27.7% |
| 3330308 | 207.1.1.103 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 | 0.84 | 79.0 | 5.41e-01 | 100.0% | 39.7% |
| 3680931 | 207.1.1.103 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 | 0.84 | 79.0 | 6.73e-01 | 100.0% | 85.0% |
| 4396873 | 207.1.1.199 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_TTSS | 0.84 | 79.0 | 5.34e-01 | 100.0% | 32.2% |
| 3422497 | 145.1.1.40 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › LRR_At5g56370 | 0.83 | 78.0 | 5.12e-01 | 100.0% | 29.7% |
| 3238030 | 207.1.1.201 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_8, LRR_9 | 0.83 | 78.0 | 4.83e-01 | 100.0% | 23.3% |
| 328456 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.82 | 77.0 | 5.89e-01 | 100.0% | 57.5% |
| 3242103 | 207.1.1.104 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_Zer-1 | 0.81 | 75.0 | 5.54e-01 | 100.0% | 60.0% |
| 3213745 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.81 | 75.0 | 5.52e-01 | 100.0% | 57.6% |
| 3444673 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.80 | 74.0 | 6.11e-01 | 100.0% | 86.7% |
| 3784447 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.79 | 74.0 | 5.34e-01 | 100.0% | 40.3% |
| 3285185 | 2003.1.7.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › DeoRC | 0.50 | 45.0 | 3.80e-01 | 99.2% | 97.5% |
D2
medium
residues 317-421