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putative_mRNA_capping_enzyme
Euk-VirAcanthamoeba_polyphaga_mimivirus
putative_mRNA_capping_enzyme__YP_003986809__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003986809 ↗
- Protein ID:
- putative_mRNA_capping_enzyme
- Kingdom:
- euk
Quality
67.1
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 221-296
D2
medium
residues 15-37_64-176
Domain cluster:
rep: Adenylation_DNA_ligase_like_superfamily_domain__YP_008437195__Pandoravirus_salinus__1349410__D92-124_182-237_296-354
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ckmA01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.83 | 77.0 | 7.36e-01 | 98.5% | 99.4% |
| 4pz6A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.81 | 76.0 | 6.17e-01 | 99.3% | 77.5% |
| 1xk5A01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.78 | 62.0 | 5.33e-01 | 83.1% | 55.8% |
| 3rtxA01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.78 | 72.0 | 6.74e-01 | 97.8% | 90.9% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 26.0 | 3.48e-01 | 77.9% | 80.6% |
| 2vpjA00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.52 | 41.0 | 3.23e-01 | 83.1% | 48.8% |
| 7emfR01 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.51 | 37.0 | 3.48e-01 | 77.2% | 79.4% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7118 | 206.1.3.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › mRNA_cap_enzyme | 0.83 | 79.0 | 6.48e-01 | 100.0% | 78.9% |
| 3500957 | 206.1.3.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › mRNA_cap_enzyme | 0.78 | 72.0 | 5.71e-01 | 97.1% | 76.0% |
| 3716788 | 206.1.3.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › mRNA_cap_enzyme | 0.78 | 73.0 | 5.79e-01 | 100.0% | 70.8% |
| 3610835 | 206.1.3.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › mRNA_cap_enzyme | 0.77 | 72.0 | 5.51e-01 | 99.3% | 67.6% |
| 3701347 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 69.0 | 4.99e-01 | 100.0% | 47.9% |
| 3298149 | 206.1.3.30 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › SPN1_m3Gcap_bd | 0.71 | 65.0 | 5.25e-01 | 95.6% | 73.3% |
| 3510295 | 206.1.3.30 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › SPN1_m3Gcap_bd | 0.69 | 63.0 | 5.23e-01 | 95.6% | 69.3% |
D3
medium
residues 52-63_177-220