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putative_major_envelope_glycoprotein
Euk-VirAlcelaphine_gammaherpesvirus_1
putative_major_envelope_glycoprotein__NP_065568__Alcelaphine_gammaherpesvirus_1__35252
Identity
- Accession:
- NP_065568 ↗
- Protein ID:
- putative_major_envelope_glycoprotein
- Kingdom:
- euk
Quality
87.0
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Macavirus›
Alcelaphine_gammaherpesvirus_1
TaxID: 35252
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-168_388-418
D2
medium
residues 213-252
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ihjA02 | 1.10.287.1970 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 46.0 | 4.73e-01 | 72.5% | 86.8% |
| 8d8lN01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 47.0 | 3.80e-01 | 75.0% | 39.5% |
| 3ikoC02 | 1.10.3450.20 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › | 0.66 | 47.0 | 3.22e-01 | 75.0% | 40.9% |
| 5aj3N01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 48.0 | 3.77e-01 | 80.0% | 38.5% |
| 6e6oA00 | 1.20.50.10 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › Pheromone ER-1 | 0.62 | 45.0 | 4.50e-01 | 75.0% | 85.0% |
| 5z62E00 | 1.25.40.40 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI | 0.61 | 44.0 | 3.26e-01 | 77.5% | 39.4% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.60 | 44.0 | 3.90e-01 | 75.0% | 52.5% |
| 2hepA00 | 1.10.287.540 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.59 | 45.0 | 4.47e-01 | 85.0% | 90.5% |
| 1go3F02 | 6.10.140.10 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 48.0 | 4.63e-01 | 100.0% | 87.2% |
| 1zklA00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.56 | 42.0 | 2.62e-01 | 100.0% | 36.6% |
| 1ze0A01 | 1.20.120.700 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nitrate reductase, subunit delta (NarJ) | 0.55 | 42.0 | 3.51e-01 | 95.0% | 95.2% |
| 3fewX02 | 3.30.1310.40 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › | 0.54 | 41.0 | 3.15e-01 | 82.5% | 90.5% |
| 3besR03 | 6.10.140.1480 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 41.0 | 3.78e-01 | 87.5% | 94.6% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 36.0 | 3.13e-01 | 85.0% | 63.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3190774 | 316.1.1.25 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Nrap_D4 | 0.71 | 53.0 | 3.36e-01 | 82.5% | 51.6% |
| 4995746 | 2006.1.1.78 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › QueC | 0.69 | 55.0 | 3.54e-01 | 97.5% | 86.2% |
| 3808540 | 376.1.6.9 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › PF26200 | 0.66 | 52.0 | 3.65e-01 | 95.0% | 29.3% |
| 3516461 | 603.1.1.103 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 | 0.63 | 47.0 | 3.42e-01 | 80.0% | 75.5% |
D3
medium
residues 281-387_419-468
Domain cluster:
rep: putative_major_envelope_glycoprotein__YP_009042048__Bovine_gammaherpesvirus_6__1504288__D178-216_344-465
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 56.2 | 4.30e-15 | 68.2% | 19.2% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7xuxB01 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.54 | 42.0 | 3.66e-01 | 82.2% | 81.0% |