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putative_mannosyltransferase_OCH1-like_protein

Euk-Vir

Brazilian_marseillevirus

putative_mannosyltransferase_OCH1-like_protein__YP_009238661__Brazilian_marseillevirus__1813599

Identity

Accession:
YP_009238661 ↗
Protein ID:
putative_mannosyltransferase_OCH1-like_protein
Kingdom:
euk

Quality

76.8 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Brazilian_marseillevirus

TaxID: 1813599

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-55
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01424.29 best R3H 34.4 2.50e-08 87.3% 66.7%
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fphX01 3.30.1370.160 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.80 73.0 6.44e-01 100.0% 72.7%
3lp8A01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.70 52.0 4.38e-01 83.6% 47.8%
1ve3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 59.0 4.02e-01 100.0% 44.3%
3r2qA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.65 52.0 4.27e-01 94.5% 58.4%
4mz0B05 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.63 48.0 4.54e-01 83.6% 76.1%
6hxqA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 49.0 3.79e-01 90.9% 37.2%
2jrmA00 1.10.10.620 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ribosome modulation factor like domain 0.62 46.0 4.51e-01 85.5% 75.0%
2k6xA00 1.10.220.120 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Sigma-70 factor, region 1.1 0.62 48.0 4.53e-01 90.9% 86.1%
4asvA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.61 42.0 3.82e-01 74.5% 60.8%
3mgdB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 51.0 3.73e-01 98.2% 52.0%
7zhdA01 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.58 41.0 3.04e-01 74.5% 83.1%
2kvdA02 1.10.720.30 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain 0.58 32.0 3.23e-01 90.9% 50.0%
5d1rB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 49.0 3.28e-01 98.2% 54.4%
1a9xA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 46.0 3.83e-01 100.0% 47.4%
1zk8B02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 45.0 3.63e-01 100.0% 73.5%
7ce1A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.55 36.0 3.74e-01 76.4% 71.2%
4od8D00 6.10.140.1880 Special › Helix non-globular › Helix Hairpins › 0.53 41.0 4.29e-01 89.1% 96.1%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3987280 320.1.1.3 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › YlmH_1st 0.79 71.0 6.09e-01 100.0% 67.1%
3503079 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.76 69.0 6.35e-01 100.0% 78.6%
5061832 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.71 57.0 3.86e-01 90.9% 30.5%
4939437 2003.1.1.9 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › AdoHcyase_NAD 0.66 47.0 3.16e-01 90.9% 18.8%
4015380 109.4.1.1228 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_24 0.63 52.0 4.19e-01 90.9% 55.2%
5060007 5059.1.1.1 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.63 46.0 3.60e-01 83.6% 94.8%
3720908 109.4.1.22 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N 0.59 48.0 3.04e-01 94.5% 17.9%
3909630 601.48.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain 0.58 44.0 4.08e-01 90.9% 64.0%
4884642 2004.1.1.430 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn 0.57 47.0 3.10e-01 100.0% 59.8%
4992981 132.1.1.0 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) 0.57 46.0 4.50e-01 90.9% 86.7%
4942049 152.1.1.1 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RPB6 › RNA_pol_Rpb6 0.56 39.0 3.54e-01 72.7% 93.3%
2141651 913.1.1.5 ↗ few secondary structure elements › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › PF29282 0.55 45.0 3.60e-01 96.4% 80.2%
3498206 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 40.0 3.87e-01 81.8% 87.7%
4638707 213.1.1.27 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.54 45.0 3.49e-01 100.0% 80.7%
4565026 130.1.1.1 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP 0.52 33.0 2.99e-01 85.5% 45.3%
4985531 152.1.2.1 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6 0.50 36.0 3.52e-01 94.5% 70.0%
D2 medium residues 56-121
PDB