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putative_metal-dependent_hydrolase

Euk-Vir

Cafeteria_roenbergensis_virus_BV-PW1

putative_metal-dependent_hydrolase__YP_003969923__Cafeteria_roenbergensis_virus_BV-PW1__693272

Identity

Accession:
YP_003969923 ↗
Protein ID:
putative_metal-dependent_hydrolase
Kingdom:
euk

Quality

80.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 25-60_87-129
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h1dA03 3.30.2410.10 Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic fold › Hect, E3 ligase catalytic domain 0.56 43.0 3.98e-01 88.6% 88.4%
5ucoA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.56 40.0 3.31e-01 77.2% 71.9%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None 0.77 63.0 5.41e-01 87.3% 63.3%
3720589 2498.1.1.36 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › WLM 0.76 62.0 5.13e-01 87.3% 60.0%
5064807 2498.1.1.9 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 0.62 54.0 3.93e-01 98.7% 36.0%
3497680 5054.1.1.63 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, YVC1_C 0.53 37.0 2.46e-01 73.4% 31.9%
3246112 2498.1.1.2 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Astacin 0.52 40.0 3.07e-01 84.8% 38.0%
D2 medium residues 61-86_130-195
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wpaA01 6.10.140.340 Special › Helix non-globular › Helix Hairpins › 0.67 31.0 3.04e-01 70.7% 40.4%
1gcvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.55 40.0 3.51e-01 77.2% 79.3%
3wctD00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 38.0 3.34e-01 77.2% 75.5%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.53 31.0 3.74e-01 75.0% 88.5%
4kvmA02 1.25.40.1010 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 36.0 2.76e-01 71.7% 68.5%
2qsbA00 1.20.1440.50 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like 0.51 34.0 3.53e-01 71.7% 72.9%
1s9qA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.51 38.0 2.98e-01 83.7% 49.1%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3707773 4156.1.1.4 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C 0.58 48.0 3.92e-01 91.3% 93.1%
3179942 4156.1.1.4 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C 0.57 48.0 3.89e-01 92.4% 93.3%