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putative_nucleocapsid_protein

Euk-Vir

Emaravirus_fici

putative_nucleocapsid_protein__YP_009237270__Emaravirus_fici__1980427

Identity

Accession:
YP_009237270 ↗
Protein ID:
putative_nucleocapsid_protein
Kingdom:
euk

Quality

77.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 74-202
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25629.2 best Fimo_NCAP 185.2 2.30e-54 100.0% 48.9%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4iduB01 1.20.142.20 Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › 0.67 54.0 5.51e-01 86.0% 86.6%
3zlaD01 1.20.142.20 Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › 0.66 54.0 5.47e-01 86.0% 87.3%
4bgpA01 1.20.142.20 Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › 0.65 53.0 5.37e-01 86.0% 87.4%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1811356 3644.1.1.1 alpha complex topology › Leanyer virus nucleoprotein-related › Leanyer virus nucleoprotein-related › Leanyer virus nucleoprotein-related › Hanta_nucleocap 0.56 51.0 3.96e-01 100.0% 63.4%