putative_nucleoprotein

Euk-Vir

Changping_Tick_Virus_2

putative_nucleoprotein__YP_009177706__Changping_Tick_Virus_2__1608044

Identity

72.4 mean pLDDT

Orthornavirae› Negarnaviricota› Monjiviricetes› Jingchuvirales› Chuviridae› Mivirus› Changping_Tick_Virus_2

TaxID: 1608044

View cluster (9 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 73-225

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3cxbA03	1.10.1740.30	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain	0.51	25.0	3.23e-01	94.1%	82.7%
1tzvA00	1.10.940.10	Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like	0.50	32.0	3.31e-01	90.8%	66.7%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3967936	142.1.1.3 ↗	alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2	0.56	26.0	3.58e-01	94.1%	88.0%
5036957	3542.1.1.2 ↗	alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › SPP	0.51	38.0	3.20e-01	77.1%	62.9%

D2 high residues 318-448

PDB

Domain cluster: rep: ORF4__YP_009254003__Lonestar_tick_chuvirus_1__1844927__D3-107

D3 medium residues 227-314

PDB

Domain cluster: rep: ORF3__YP_009177220__Suffolk_virus__1577137__D211-285