putative_nucleoprotein

Euk-Vir

Beihai_rhabdo-like_virus_6

putative_nucleoprotein__YP_009333410__Beihai_rhabdo-like_virus_6__1922656

Identity

72.0 mean pLDDT

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Nyamiviridae› Crustavirus› Beihai_rhabdo-like_virus_6

TaxID: 1922656

View cluster (23 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-217

PDB

Domain cluster: rep: nucleocapsid,_partial__YP_009044206__Sierra_Nevada_virus__1424280__D27-195

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1svmA01	1.10.10.510	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain	0.52	26.0	3.55e-01	84.1%	94.4%
2k3nA00	1.10.274.60	Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain	0.51	33.0	3.54e-01	99.5%	73.8%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3728634	109.3.1.2 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2	0.51	27.0	2.39e-01	100.0%	32.2%

D2 high residues 222-333

PDB

Domain cluster: rep: N__YP_009508485__Southwest_carpet_python_virus__2016402__D213-328

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06407.16 best	BDV_P40	31.1	1.70e-07	100.0%	22.6%