putative_nucleoprotein

Euk-Vir

Wuhan_pillworm_virus_2

putative_nucleoprotein__YP_009345047__Wuhan_pillworm_virus_2__1923745

Identity

87.8 mean pLDDT

View cluster (144 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 39-216

PDB

Domain cluster: rep: nucleocapsid_protein__YP_008686596__Drosophila_obscura_sigmavirus_10A__666962__D36-146_214-247

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00945.24 best	Rhabdo_ncap	74.7	1.00e-20	100.0%	44.4%

D2 high residues 222-415

PDB

Domain cluster: rep: nucleoprotein__YP_009094365__Almpiwar_virus__318843__D225-426

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00945.24 best	Rhabdo_ncap	93.1	2.60e-26	92.8%	30.7%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2gicD02	1.10.3610.10	Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like › Nucleoprotein	0.90	85.0	8.54e-01	100.0%	96.4%
2gttJ02	1.10.3610.10	Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like › Nucleoprotein	0.85	78.0	7.90e-01	100.0%	96.8%
1n93X02	1.10.3050.10	Mainly Alpha › Orthogonal Bundle › borna disease virus nucleoprotein, domain 2 › borna disease virus nucleoprotein, domain 2	0.63	41.0	4.95e-01	70.6%	100.0%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2966640	566.2.1.1 ↗	alpha complex topology › P40 nucleoprotein-like › Rhabdovirus nucleocapsid protein › Rhabdovirus nucleocapsid protein › Rhabdo_ncap	0.91	81.0	6.09e-01	100.0%	44.0%
2749214	566.1.1.1 ↗	alpha complex topology › P40 nucleoprotein-like › P40 nucleoprotein-related › P40 nucleoprotein-related › Paramyxo_ncap	0.68	43.0	3.44e-01	71.1%	31.4%
1763953	566.1.1.3 ↗	alpha complex topology › P40 nucleoprotein-like › P40 nucleoprotein-related › P40 nucleoprotein-related › Pneumo_ncap	0.64	42.0	3.40e-01	71.1%	34.1%