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putative_polynucleotide_kinase
Euk-VirPithovirus_sibericum
putative_polynucleotide_kinase__YP_009001177__Pithovirus_sibericum__1450746
Identity
- Accession:
- YP_009001177 ↗
- Protein ID:
- putative_polynucleotide_kinase
- Kingdom:
- euk
Quality
84.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 14-85
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.66 | 40.0 | 4.14e-01 | 88.9% | 63.8% |
| 1ksiA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 52.0 | 4.73e-01 | 87.5% | 84.4% |
| 1ksiA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 53.0 | 4.86e-01 | 91.7% | 94.8% |
| 5xu6C01 | 3.30.200.110 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Inositol-pentakisphosphate 2-kinase, N-lobe | 0.63 | 44.0 | 3.88e-01 | 73.6% | 88.9% |
| 3loyA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 52.0 | 4.65e-01 | 91.7% | 85.1% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.61 | 35.0 | 3.96e-01 | 72.2% | 75.9% |
| 2e8yA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 43.0 | 3.99e-01 | 73.6% | 100.0% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.60 | 47.0 | 4.74e-01 | 83.3% | 91.5% |
| 4hgzA02 | 2.20.25.570 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.60 | 39.0 | 4.22e-01 | 70.8% | 80.0% |
| 3al9A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 50.0 | 3.12e-01 | 97.2% | 55.6% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 36.0 | 4.22e-01 | 73.6% | 93.6% |
| 4huzA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 38.0 | 2.99e-01 | 76.4% | 31.1% |
| 3m2oA01 | 3.30.720.120 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.59 | 34.0 | 3.81e-01 | 73.6% | 75.5% |
| 1zu0A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.59 | 47.0 | 3.57e-01 | 88.9% | 85.2% |
| 2xu8A00 | 3.90.70.190 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Domain of unknown function (DUF5086) | 0.58 | 40.0 | 3.42e-01 | 70.8% | 47.4% |
| 3lzhA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 44.0 | 4.11e-01 | 81.9% | 100.0% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.58 | 44.0 | 4.18e-01 | 88.9% | 67.8% |
| 2r55A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 45.0 | 3.42e-01 | 91.7% | 54.8% |
| 3havA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 46.0 | 4.28e-01 | 87.5% | 96.6% |
| 2ymsA00 | 2.40.128.630 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 46.0 | 3.85e-01 | 88.9% | 57.3% |
| 5upiA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.57 | 46.0 | 3.45e-01 | 90.3% | 58.5% |
| 2ffsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 44.0 | 3.57e-01 | 90.3% | 42.8% |
| 3tfzB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 48.0 | 3.76e-01 | 98.6% | 61.2% |
| 3u97A00 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.56 | 44.0 | 4.38e-01 | 86.1% | 100.0% |
| 3hwcA02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.56 | 42.0 | 3.55e-01 | 80.6% | 80.8% |
| 6ctzA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 42.0 | 3.94e-01 | 83.3% | 96.8% |
| 3qszA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 45.0 | 3.40e-01 | 90.3% | 63.3% |
| 5swiD01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 44.0 | 3.11e-01 | 90.3% | 46.7% |
| 3m07A04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 38.0 | 3.93e-01 | 73.6% | 100.0% |
| 2e3nA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 44.0 | 3.17e-01 | 91.7% | 54.5% |
| 5iqaA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 42.0 | 3.99e-01 | 86.1% | 98.9% |
| 2arzA02 | 3.20.180.10 | Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like | 0.54 | 39.0 | 3.66e-01 | 76.4% | 73.9% |
| 6serA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 43.0 | 3.15e-01 | 93.1% | 50.4% |
| 1jssA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 42.0 | 3.19e-01 | 90.3% | 57.8% |
| 2mouA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 42.0 | 3.15e-01 | 93.1% | 54.1% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.53 | 42.0 | 3.76e-01 | 87.5% | 61.8% |
| 1kyfA01 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.52 | 36.0 | 3.04e-01 | 73.6% | 61.9% |
| 6l6jA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 36.0 | 2.96e-01 | 73.6% | 76.5% |
| 1vr5A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 40.0 | 3.19e-01 | 83.3% | 91.8% |
| 3o9zD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 40.0 | 3.10e-01 | 88.9% | 42.5% |
| 1s2oA02 | 3.90.1070.10 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.50 | 36.0 | 3.71e-01 | 79.2% | 95.8% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3463667 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.69 | 52.0 | 3.42e-01 | 90.3% | 18.2% |
| 3773898 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.66 | 42.0 | 3.80e-01 | 81.9% | 48.4% |
| 3247299 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.66 | 47.0 | 3.98e-01 | 75.0% | 59.2% |
| 5074928 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.65 | 41.0 | 4.34e-01 | 87.5% | 72.3% |
| 4953306 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 47.0 | 3.28e-01 | 80.6% | 85.4% |
| 3460209 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.61 | 50.0 | 3.20e-01 | 91.7% | 19.4% |
| 3973605 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 49.0 | 5.04e-01 | 90.3% | 100.0% |
| 3717592 | 5.1.3.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 | 0.59 | 48.0 | 2.98e-01 | 88.9% | 22.1% |
| 3468705 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.59 | 48.0 | 3.04e-01 | 88.9% | 16.7% |
| 3893410 | 5.1.3.135 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 | 0.59 | 46.0 | 2.97e-01 | 84.7% | 25.8% |
| 3878946 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.59 | 39.0 | 4.45e-01 | 86.1% | 98.0% |
| 4033832 | 3425.2.1.2 ↗ | a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain › YycI | 0.59 | 50.0 | 3.59e-01 | 95.8% | 32.0% |
| 4033616 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.59 | 44.0 | 3.31e-01 | 81.9% | 57.4% |
| 3807987 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.59 | 47.0 | 3.16e-01 | 91.7% | 35.6% |
| 3464481 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.59 | 46.0 | 2.93e-01 | 86.1% | 21.9% |
| 3829694 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.58 | 47.0 | 3.11e-01 | 91.7% | 35.2% |
| 5075779 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.57 | 47.0 | 4.62e-01 | 93.1% | 87.5% |
| 3711120 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 40.0 | 3.24e-01 | 73.6% | 57.1% |
| 3196889 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.57 | 45.0 | 2.76e-01 | 86.1% | 27.7% |
| 2755883 | 331.19.1.1 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin | 0.57 | 44.0 | 4.14e-01 | 90.3% | 67.4% |
| 1229147 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.57 | 44.0 | 2.94e-01 | 84.7% | 30.1% |
| 3164889 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.56 | 44.0 | 3.59e-01 | 86.1% | 86.1% |
| 3687983 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.56 | 46.0 | 3.74e-01 | 91.7% | 47.9% |
| 3270571 | 11.1.1.44 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 | 0.56 | 39.0 | 3.29e-01 | 73.6% | 63.2% |
| 3964888 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.56 | 41.0 | 3.01e-01 | 91.7% | 27.1% |
| 5024609 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.55 | 44.0 | 3.36e-01 | 88.9% | 80.9% |
| 3703190 | 7.1.1.15 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › DUF7759 | 0.55 | 38.0 | 3.42e-01 | 72.2% | 90.3% |
| 3601211 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.55 | 45.0 | 3.11e-01 | 90.3% | 46.0% |
| 3653780 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.54 | 39.0 | 2.88e-01 | 77.8% | 56.2% |
| 3584246 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.54 | 44.0 | 3.93e-01 | 90.3% | 72.1% |
| 3595065 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 37.0 | 3.10e-01 | 73.6% | 57.9% |
| 1839315 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.54 | 43.0 | 2.89e-01 | 88.9% | 28.8% |
| 3916252 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.54 | 44.0 | 3.95e-01 | 93.1% | 93.3% |
| 4931123 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.53 | 42.0 | 4.23e-01 | 91.7% | 97.3% |
| 4949872 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.53 | 43.0 | 3.62e-01 | 91.7% | 94.6% |
| 3498699 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 44.0 | 3.34e-01 | 98.6% | 86.2% |
| 3930230 | 331.4.1.5 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1_BRSK | 0.53 | 42.0 | 3.63e-01 | 88.9% | 63.5% |
| 3198655 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.52 | 34.0 | 3.62e-01 | 76.4% | 75.4% |
| 4042443 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 35.0 | 3.30e-01 | 70.8% | 55.8% |
| 3735914 | 331.3.1.2 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A | 0.51 | 39.0 | 2.91e-01 | 86.1% | 31.8% |
| 3268245 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.51 | 41.0 | 3.74e-01 | 91.7% | 97.0% |
| 3968482 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.51 | 39.0 | 2.70e-01 | 88.9% | 32.8% |
| 5076377 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.50 | 36.0 | 3.44e-01 | 77.8% | 81.1% |
| 2075041 | 3012.1.1.3 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › S6PP | 0.50 | 36.0 | 3.71e-01 | 79.2% | 95.8% |
D2
medium
residues 86-114_247-302
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a21A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 44.0 | 4.27e-01 | 80.0% | 93.9% |
| 4r9pA00 | 2.60.200.10 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.57 | 42.0 | 3.26e-01 | 81.2% | 85.2% |
| 2x10A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 3.97e-01 | 81.2% | 95.0% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 33.0 | 3.57e-01 | 88.2% | 78.5% |
| 2rovA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 44.0 | 3.94e-01 | 89.4% | 83.8% |
| 1nbuA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.52 | 40.0 | 3.64e-01 | 83.5% | 89.8% |
| 1v89A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 42.0 | 3.81e-01 | 89.4% | 74.6% |
| 2cg8C01 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.51 | 40.0 | 3.61e-01 | 84.7% | 89.9% |
| 2o90A00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.51 | 39.0 | 3.56e-01 | 83.5% | 89.6% |
| 4ikbA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.50 | 36.0 | 3.23e-01 | 76.5% | 93.0% |
| 1dhnA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.50 | 40.0 | 3.57e-01 | 87.1% | 89.3% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3245738 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.63 | 35.0 | 3.21e-01 | 75.3% | 41.8% |
| 3866695 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.57 | 45.0 | 3.78e-01 | 88.2% | 83.2% |
| 4237534 | 330.7.1.1 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › DUF905 | 0.56 | 32.0 | 3.60e-01 | 90.6% | 75.0% |
| 3736231 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.55 | 37.0 | 3.32e-01 | 98.8% | 48.0% |
| 3782292 | 4.1.1.170 ↗ | beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind | 0.53 | 36.0 | 3.69e-01 | 81.2% | 73.8% |
| 3895887 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.53 | 41.0 | 3.53e-01 | 83.5% | 72.6% |
| 3236056 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 43.0 | 3.90e-01 | 89.4% | 80.9% |
| 3719283 | 10.37.1.1 ↗ | beta sandwiches › jelly-roll › TerD › TerD › TerD | 0.52 | 36.0 | 2.80e-01 | 71.8% | 74.7% |
| 3629599 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 39.0 | 3.64e-01 | 80.0% | 83.8% |
| 3993341 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 36.0 | 3.68e-01 | 74.1% | 77.6% |
| 3718531 | 11.1.1.360 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HYDIN_VesB_CFA65-like_Ig | 0.52 | 38.0 | 2.46e-01 | 78.8% | 24.0% |
| 3742244 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.52 | 35.0 | 3.17e-01 | 98.8% | 49.2% |
| 3195948 | 230.1.1.4 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › FolB | 0.52 | 40.0 | 3.63e-01 | 83.5% | 88.7% |
| 3267306 | 230.1.1.4 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › FolB | 0.51 | 40.0 | 3.54e-01 | 85.9% | 84.8% |
| 3202870 | 220.1.1.36 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 | 0.51 | 42.0 | 3.73e-01 | 89.4% | 80.8% |
| 3193761 | 10.13.1.1 ↗ | beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase | 0.51 | 41.0 | 3.02e-01 | 87.1% | 40.0% |
| 3634550 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 41.0 | 3.55e-01 | 89.4% | 71.9% |
| 3607981 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 34.0 | 3.60e-01 | 87.1% | 82.4% |
D3
medium
residues 115-246
Domain cluster:
rep: hypothetical_protein_F8203_gp077__YP_009701543__Heliothis_virescens_ascovirus_3f__328614__D104-230
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1auvA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.67 | 37.0 | 4.11e-01 | 72.7% | 67.6% |
| 3qwuA02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.65 | 51.0 | 4.59e-01 | 100.0% | 60.6% |
| 1s68A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.65 | 52.0 | 5.60e-01 | 96.2% | 100.0% |
| 5dmxB02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.62 | 37.0 | 3.56e-01 | 75.0% | 50.0% |
| 3vnnA00 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.53 | 44.0 | 4.57e-01 | 100.0% | 95.2% |
| 4tm5A01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.53 | 37.0 | 3.72e-01 | 71.2% | 78.0% |
| 4ckbA01 | 3.30.470.140 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › | 0.52 | 35.0 | 3.18e-01 | 100.0% | 50.0% |
| 4u7aA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 31.0 | 2.32e-01 | 95.5% | 21.1% |
| 6rarI01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.52 | 46.0 | 4.05e-01 | 100.0% | 65.1% |
| 2hivA02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.52 | 46.0 | 4.00e-01 | 100.0% | 62.6% |
| 4dimA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 39.0 | 3.36e-01 | 79.5% | 56.1% |
| 2q7dA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 36.0 | 3.12e-01 | 72.0% | 53.5% |
| 3wnzA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 39.0 | 3.85e-01 | 80.3% | 88.2% |
| 1xk5A01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.51 | 41.0 | 3.55e-01 | 100.0% | 56.3% |
| 2cfmA02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.51 | 45.0 | 3.94e-01 | 100.0% | 64.2% |
| 1vs0A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.51 | 40.0 | 4.29e-01 | 96.2% | 100.0% |
| 3l2pA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.50 | 42.0 | 4.43e-01 | 95.5% | 100.0% |
| 3votB02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.50 | 38.0 | 2.95e-01 | 79.5% | 41.3% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 193072 | 206.1.3.23 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_ligase | 0.63 | 57.0 | 4.73e-01 | 100.0% | 74.0% |
| 3592457 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.58 | 41.0 | 2.94e-01 | 72.7% | 26.4% |
| 4995719 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.57 | 46.0 | 4.16e-01 | 100.0% | 64.0% |
| 3602296 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.55 | 51.0 | 4.23e-01 | 100.0% | 64.9% |
| 4237088 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.54 | 45.0 | 3.94e-01 | 100.0% | 59.0% |
| 4098851 | 4095.1.1.2 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_M+DNA_ligase_A_N | 0.54 | 49.0 | 3.64e-01 | 100.0% | 43.0% |
| 3968582 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.53 | 46.0 | 4.06e-01 | 100.0% | 64.2% |
| 3581071 | 4095.1.1.2 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_M+DNA_ligase_A_N | 0.53 | 47.0 | 3.29e-01 | 100.0% | 29.9% |
| 1837660 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.53 | 44.0 | 4.57e-01 | 100.0% | 95.2% |
| 3799247 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.53 | 47.0 | 3.76e-01 | 100.0% | 48.8% |
| 3288874 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.53 | 43.0 | 3.80e-01 | 100.0% | 59.0% |
| 4666907 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.53 | 47.0 | 4.02e-01 | 100.0% | 61.5% |
| 3795817 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.53 | 47.0 | 3.71e-01 | 100.0% | 47.9% |
| 4947307 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.53 | 48.0 | 3.52e-01 | 100.0% | 38.5% |
| 4056196 | 4095.1.1.2 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_M+DNA_ligase_A_N | 0.52 | 47.0 | 3.24e-01 | 100.0% | 29.3% |
| 4960010 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.52 | 46.0 | 3.92e-01 | 100.0% | 59.1% |
| 4937749 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.52 | 47.0 | 3.50e-01 | 100.0% | 39.4% |
| 4951306 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.52 | 45.0 | 3.15e-01 | 100.0% | 29.6% |
| 5036153 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.52 | 46.0 | 4.01e-01 | 100.0% | 64.6% |
| 4977191 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.52 | 47.0 | 3.95e-01 | 100.0% | 60.0% |
| 4683228 | 4095.1.1.2 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_M+DNA_ligase_A_N | 0.52 | 46.0 | 3.24e-01 | 100.0% | 32.5% |
| 4947392 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.52 | 45.0 | 3.89e-01 | 100.0% | 60.0% |
| 3960632 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.52 | 45.0 | 3.89e-01 | 100.0% | 61.0% |
| 4631711 | 4095.1.1.3 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_M | 0.52 | 45.0 | 3.22e-01 | 100.0% | 32.5% |
| 3927529 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.51 | 46.0 | 3.82e-01 | 100.0% | 59.6% |
| 3643093 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.51 | 46.0 | 3.78e-01 | 100.0% | 54.9% |
| 4935888 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.51 | 46.0 | 3.41e-01 | 100.0% | 38.5% |
| 5024218 | 206.1.3.23 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_ligase | 0.51 | 46.0 | 3.50e-01 | 100.0% | 55.9% |
| 5031580 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.51 | 46.0 | 3.98e-01 | 100.0% | 64.5% |
| 4399570 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.51 | 46.0 | 3.88e-01 | 100.0% | 58.7% |
| 3253455 | 4095.1.1.2 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_M+DNA_ligase_A_N | 0.51 | 46.0 | 3.20e-01 | 100.0% | 30.7% |
| 5042001 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.51 | 46.0 | 3.42e-01 | 100.0% | 40.0% |
| 4213407 | 4095.1.1.2 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_M+DNA_ligase_A_N | 0.51 | 44.0 | 3.14e-01 | 100.0% | 31.1% |
| 3922871 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.51 | 46.0 | 3.82e-01 | 100.0% | 58.3% |
| 4153293 | 245.1.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 | 0.51 | 34.0 | 3.59e-01 | 85.6% | 75.8% |
| 4325132 | 4095.1.1.2 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_M+DNA_ligase_A_N | 0.50 | 46.0 | 3.44e-01 | 100.0% | 40.9% |
| 4945406 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.50 | 44.0 | 3.83e-01 | 100.0% | 61.4% |
| 3476026 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.50 | 45.0 | 3.60e-01 | 100.0% | 60.7% |
| 4966636 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.50 | 46.0 | 3.90e-01 | 100.0% | 62.4% |
D4
medium
residues 306-450
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wqoD00 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.58 | 35.0 | 3.64e-01 | 82.1% | 61.7% |
| 2wzkA03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.57 | 33.0 | 3.67e-01 | 82.8% | 72.7% |
| 1mijA00 | 1.10.10.500 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeo-prospero domain | 0.55 | 44.0 | 4.48e-01 | 86.2% | 87.8% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.53 | 28.0 | 3.26e-01 | 82.8% | 68.2% |
| 4gc0A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.52 | 42.0 | 3.52e-01 | 86.2% | 81.9% |
| 1sqgA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.51 | 41.0 | 4.20e-01 | 98.6% | 88.7% |
| 3kh1A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.50 | 37.0 | 3.37e-01 | 96.6% | 55.9% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3871969 | 5054.1.1.69 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Serinc | 0.59 | 46.0 | 4.17e-01 | 80.7% | 63.7% |
| 3702110 | 593.1.1.0 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like | 0.56 | 48.0 | 4.05e-01 | 95.2% | 98.1% |
| 3832127 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.53 | 27.0 | 2.94e-01 | 92.4% | 55.2% |
| 5060287 | 5051.1.1.3 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SSF | 0.53 | 46.0 | 3.22e-01 | 95.9% | 86.9% |
| 3666433 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 38.0 | 4.07e-01 | 89.7% | 88.0% |