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putative_proliferating_cell_nuclear_antigen

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

putative_proliferating_cell_nuclear_antigen__YP_003986598__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:
YP_003986598 ↗
Protein ID:
putative_proliferating_cell_nuclear_antigen
Kingdom:
euk

Quality

73.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-151
PDB
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.91 70.0 5.77e-01 89.1% 48.7%
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.89 68.0 5.54e-01 90.5% 46.7%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.89 71.0 5.81e-01 92.5% 49.4%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.89 69.0 5.63e-01 89.8% 47.8%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.88 71.0 5.72e-01 90.5% 47.7%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.87 70.0 7.61e-01 89.1% 97.6%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.87 71.0 5.74e-01 90.5% 49.0%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.86 68.0 5.62e-01 91.2% 50.0%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.86 66.0 5.47e-01 89.8% 48.3%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.84 67.0 5.47e-01 90.5% 47.8%
1sxjH02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.82 67.0 7.18e-01 91.8% 97.7%
5wceA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.81 63.0 6.92e-01 92.5% 98.3%
3pweA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.81 61.0 6.65e-01 89.8% 92.7%
4trtA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 63.0 6.89e-01 91.2% 98.3%
6ptrB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 59.0 6.73e-01 89.1% 99.1%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 70.0 5.58e-01 91.8% 51.3%
1b77A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.75 57.0 4.85e-01 92.5% 50.9%
1y7pB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.56 26.0 3.54e-01 96.6% 82.5%
5m59A06 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.55 29.0 3.23e-01 78.2% 63.4%
1amiA04 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.51 43.0 3.74e-01 91.2% 84.6%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5044014 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.91 69.0 7.84e-01 89.1% 100.0%
4142781 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.90 71.0 7.70e-01 91.2% 95.2%
4096140 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.90 71.0 7.77e-01 89.8% 96.0%
4941928 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.90 70.0 7.79e-01 91.2% 98.3%
4939065 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.90 68.0 7.50e-01 90.5% 95.0%
4937819 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.89 71.0 7.72e-01 90.5% 96.0%
4302174 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.89 69.0 7.52e-01 90.5% 93.6%
4987602 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.89 70.0 7.65e-01 89.8% 95.2%
5990 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.89 68.0 7.42e-01 90.5% 93.4%
143269 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.89 69.0 7.49e-01 89.8% 93.6%
4178829 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.89 69.0 7.54e-01 91.2% 94.4%
5047575 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.89 70.0 7.58e-01 90.5% 95.2%
4172290 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.88 71.0 7.58e-01 90.5% 93.8%
4059128 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.88 67.0 7.39e-01 90.5% 95.0%
5056757 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.88 69.0 7.53e-01 91.8% 95.2%
4943404 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.88 71.0 7.56e-01 90.5% 93.8%
5078494 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.88 69.0 7.44e-01 90.5% 94.4%
2442100 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.88 74.0 7.67e-01 93.9% 93.4%
5052550 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.88 71.0 7.73e-01 91.2% 98.4%
4980359 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.87 66.0 7.29e-01 90.5% 95.0%
3936915 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.87 72.0 7.68e-01 91.2% 96.2%
5070586 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.87 69.0 7.44e-01 91.2% 95.2%
4870150 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.87 71.0 7.41e-01 90.5% 91.8%
5023031 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.87 70.0 7.56e-01 91.8% 97.6%
5033948 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 68.0 7.25e-01 91.2% 91.5%
4998585 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.86 67.0 7.46e-01 91.8% 98.3%
5027066 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.86 69.0 7.47e-01 92.5% 96.8%
5011281 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.86 67.0 7.31e-01 91.2% 95.2%
3932752 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.86 69.0 7.51e-01 93.2% 98.4%
5037314 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.86 66.0 7.30e-01 89.1% 97.5%
5029787 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.85 67.0 7.35e-01 92.5% 98.3%
4456195 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.85 67.0 7.39e-01 91.8% 99.2%
4943405 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.85 69.0 7.44e-01 91.2% 97.6%
3624709 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.85 73.0 7.72e-01 98.6% 100.0%
5052551 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.85 68.0 7.31e-01 92.5% 96.8%
2392831 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.85 67.0 7.26e-01 91.2% 95.3%
2588759 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.84 67.0 7.40e-01 91.8% 100.0%
5060716 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.84 70.0 7.41e-01 91.2% 96.2%
5039026 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.84 62.0 6.86e-01 90.5% 92.5%
4939066 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.84 68.0 7.27e-01 91.8% 95.3%
5051689 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.84 67.0 7.28e-01 91.2% 96.8%
4998584 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 71.0 7.40e-01 91.8% 94.8%
3788095 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.84 70.0 7.36e-01 91.2% 94.1%
4956740 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.84 67.0 7.30e-01 91.2% 97.6%
5028024 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.84 68.0 7.23e-01 92.5% 94.6%
3406312 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.84 67.0 7.35e-01 92.5% 100.0%
4660283 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.83 67.0 7.25e-01 91.2% 97.6%
5010672 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.83 66.0 7.26e-01 91.2% 100.0%
3230926 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.83 69.0 7.28e-01 93.9% 96.9%
3478975 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.83 68.0 7.09e-01 90.5% 91.9%
3997015 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.83 67.0 7.15e-01 90.5% 94.6%
3256903 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.83 71.0 7.41e-01 93.2% 97.0%
5000468 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.83 68.0 7.33e-01 92.5% 100.0%
3936914 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.82 68.0 7.22e-01 92.5% 96.9%
3230925 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.82 68.0 7.25e-01 92.5% 96.9%
4025727 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.82 69.0 7.11e-01 90.5% 92.1%
3624708 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.82 68.0 7.07e-01 92.5% 93.3%
4212381 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 67.0 7.04e-01 92.5% 92.6%
4026069 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 68.0 7.07e-01 91.2% 93.3%
3804177 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.82 71.0 7.16e-01 89.8% 97.2%
4619259 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.82 72.0 7.26e-01 98.6% 93.1%
4102438 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.81 61.0 6.78e-01 89.8% 95.0%
3478976 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.81 61.0 6.89e-01 81.6% 99.1%
4013292 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.81 68.0 7.15e-01 91.8% 95.6%
3738030 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.81 67.0 7.06e-01 91.2% 94.1%
5039027 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.81 63.0 6.97e-01 91.8% 99.2%
3551142 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.81 67.0 6.80e-01 91.8% 87.6%
3292092 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 70.0 7.38e-01 95.9% 99.3%
3022412 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.81 69.0 7.07e-01 91.8% 92.3%
3932751 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.81 66.0 6.99e-01 90.5% 95.4%
5000467 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 70.0 7.30e-01 91.2% 98.5%
3507498 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.80 70.0 7.02e-01 91.2% 92.0%
4860663 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.80 62.0 6.34e-01 91.2% 82.9%
3789624 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.80 69.0 7.08e-01 91.2% 93.6%
4426056 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.79 71.0 6.96e-01 93.2% 88.4%
3625038 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.79 68.0 7.01e-01 91.2% 94.3%
4876748 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.79 61.0 6.59e-01 92.5% 94.4%
3244230 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.79 69.0 6.85e-01 91.2% 93.3%
3599554 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.79 68.0 6.82e-01 91.2% 93.3%
4057937 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.78 66.0 6.88e-01 93.2% 95.5%
3407530 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.78 65.0 6.76e-01 91.2% 94.1%
3734891 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.78 68.0 6.81e-01 91.2% 96.7%
3782606 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.78 69.0 7.01e-01 93.2% 95.2%
3719897 227.1.1.18 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_C 0.75 57.0 6.19e-01 88.4% 93.6%
3596476 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.74 65.0 6.59e-01 91.2% 98.6%
D2 high residues 164-270
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.91 87.0 6.34e-01 100.0% 45.4%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.91 87.0 6.38e-01 100.0% 45.7%
1sxjH02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.89 85.0 7.92e-01 100.0% 91.4%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.89 85.0 6.18e-01 100.0% 45.3%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.89 84.0 6.22e-01 100.0% 44.5%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.88 84.0 6.24e-01 100.0% 47.5%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.88 82.0 6.25e-01 98.1% 48.4%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.87 82.0 6.14e-01 100.0% 46.3%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.86 81.0 6.07e-01 100.0% 47.1%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.86 81.0 5.93e-01 100.0% 46.7%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.86 80.0 7.55e-01 99.1% 92.7%
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.85 81.0 5.99e-01 100.0% 45.5%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.85 79.0 5.75e-01 100.0% 48.3%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.85 79.0 5.89e-01 100.0% 45.4%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.84 78.0 5.76e-01 100.0% 45.5%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.82 76.0 6.40e-01 100.0% 74.9%
1vpkA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 75.0 7.23e-01 100.0% 91.6%
5agvA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 75.0 6.95e-01 100.0% 90.1%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 74.0 5.95e-01 100.0% 55.4%
4trtA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 73.0 6.98e-01 100.0% 87.7%
5aguA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 72.0 6.81e-01 100.0% 91.3%
3pweA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 71.0 6.79e-01 100.0% 88.6%
4rkiA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 70.0 6.55e-01 100.0% 89.2%
1b77A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.75 69.0 5.28e-01 100.0% 46.5%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.56 37.0 4.17e-01 98.1% 86.9%
3eb8B01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.53 27.0 3.52e-01 92.5% 86.9%
3vnnA00 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.52 41.0 3.95e-01 85.0% 91.9%
3n8hA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.51 28.0 3.25e-01 93.5% 73.7%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.51 29.0 3.39e-01 100.0% 81.7%
2a6hC05 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 35.0 3.94e-01 86.0% 100.0%
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 44.0 4.11e-01 94.4% 82.4%
1xk5A01 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.51 40.0 3.25e-01 84.1% 53.8%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4055466 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.91 87.0 8.17e-01 100.0% 91.9%
4030418 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 86.0 7.75e-01 100.0% 90.7%
4456195 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.90 86.0 8.22e-01 100.0% 93.3%
4983064 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 85.0 8.07e-01 100.0% 91.9%
4948360 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 86.0 7.96e-01 100.0% 86.8%
4976500 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 86.0 7.97e-01 100.0% 88.3%
3292092 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 86.0 7.84e-01 100.0% 90.3%
4929645 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 86.0 8.04e-01 100.0% 91.2%
4992059 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 85.0 8.08e-01 100.0% 92.7%
4026069 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 86.0 7.80e-01 100.0% 88.1%
5027067 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 85.0 8.17e-01 100.0% 95.8%
4517015 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 85.0 8.03e-01 100.0% 91.1%
138072 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 85.0 7.88e-01 100.0% 89.3%
167574 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 85.0 7.87e-01 100.0% 85.5%
1290662 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 85.0 7.58e-01 100.0% 82.5%
4991675 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 85.0 7.98e-01 100.0% 91.2%
2392831 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 85.0 7.92e-01 100.0% 89.8%
3351103 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 85.0 7.73e-01 100.0% 84.4%
5037345 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 84.0 7.74e-01 100.0% 88.7%
4934002 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 84.0 7.81e-01 100.0% 86.9%
5043507 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 84.0 8.05e-01 100.0% 95.8%
4941929 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 84.0 7.85e-01 100.0% 88.3%
4956740 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 84.0 7.92e-01 100.0% 92.0%
309454 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.89 84.0 7.74e-01 100.0% 85.6%
143428 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 84.0 8.07e-01 100.0% 90.8%
2805173 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 84.0 7.88e-01 100.0% 89.6%
4646871 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 84.0 7.92e-01 100.0% 90.4%
3936914 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.88 84.0 7.74e-01 100.0% 90.0%
5029787 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 84.0 8.02e-01 100.0% 91.7%
5052551 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 83.0 7.85e-01 100.0% 89.6%
4212381 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 83.0 7.60e-01 100.0% 85.9%
3478160 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.88 83.0 7.76e-01 100.0% 92.2%
3230925 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.88 83.0 7.68e-01 100.0% 90.0%
4998585 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 83.0 7.98e-01 100.0% 91.7%
3256903 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.88 83.0 7.57e-01 100.0% 88.9%
5011281 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 83.0 7.81e-01 100.0% 89.6%
2588759 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 83.0 7.93e-01 100.0% 93.4%
5037314 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.87 82.0 7.89e-01 100.0% 94.2%
3997015 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.87 82.0 7.63e-01 100.0% 90.0%
4943405 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 83.0 7.79e-01 100.0% 92.0%
5028024 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 83.0 7.65e-01 100.0% 86.9%
3256904 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.87 82.0 7.74e-01 100.0% 94.4%
5039027 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.87 82.0 7.88e-01 100.0% 92.5%
4660283 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 82.0 7.72e-01 100.0% 92.0%
3503503 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.87 82.0 7.27e-01 100.0% 93.1%
5051689 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 82.0 7.72e-01 100.0% 91.2%
3932751 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.87 81.0 7.55e-01 100.0% 90.8%
5060716 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.87 82.0 7.58e-01 100.0% 90.8%
4936050 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 82.0 7.69e-01 100.0% 91.2%
3873544 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.86 81.0 7.47e-01 100.0% 88.8%
3412152 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.86 81.0 7.43e-01 100.0% 88.9%
5033948 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.86 81.0 7.52e-01 100.0% 86.2%
5047575 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.86 81.0 7.63e-01 100.0% 90.4%
3921654 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.86 81.0 7.42e-01 100.0% 89.5%
3744268 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.86 80.0 7.36e-01 100.0% 93.3%
4057937 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.86 81.0 7.40e-01 100.0% 86.6%
3406311 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.86 80.0 6.95e-01 100.0% 87.7%
4026073 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 80.0 7.59e-01 100.0% 96.8%
3624708 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.85 80.0 7.31e-01 100.0% 86.7%
5991 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.85 81.0 7.68e-01 100.0% 91.0%
3936915 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.85 80.0 7.40e-01 100.0% 91.5%
4172290 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 80.0 7.42e-01 100.0% 89.2%
3574882 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.85 80.0 7.25e-01 100.0% 87.0%
3798355 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.85 80.0 7.20e-01 100.0% 85.7%
4372908 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.85 80.0 7.55e-01 100.0% 86.4%
3520418 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 80.0 7.00e-01 100.0% 90.0%
4934001 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 79.0 7.49e-01 100.0% 92.8%
3722115 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.85 79.0 6.98e-01 100.0% 92.7%
2392830 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 80.0 7.37e-01 100.0% 86.3%
3743107 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.85 79.0 7.13e-01 100.0% 90.0%
5074320 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.85 79.0 7.37e-01 100.0% 91.5%
3022412 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.85 79.0 7.09e-01 100.0% 86.6%
5027066 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 79.0 7.50e-01 100.0% 88.8%
5043506 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 79.0 7.49e-01 100.0% 88.8%
4995027 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 80.0 7.55e-01 100.0% 87.2%
4987602 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 79.0 7.46e-01 100.0% 90.4%
5070586 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 79.0 7.45e-01 100.0% 90.4%
3210421 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.84 79.0 6.84e-01 100.0% 87.1%
3787700 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.84 79.0 6.84e-01 100.0% 95.5%
3715457 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.84 79.0 6.89e-01 100.0% 92.1%
4302174 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 79.0 7.42e-01 100.0% 88.8%
3602548 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 78.0 7.41e-01 100.0% 89.6%
3193266 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.83 77.0 6.91e-01 100.0% 89.7%
3787933 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.83 77.0 6.63e-01 100.0% 89.4%
3251867 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.83 78.0 7.22e-01 100.0% 90.0%
3230926 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.83 77.0 7.19e-01 100.0% 88.5%
4178829 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 78.0 7.35e-01 100.0% 88.0%
3599554 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.82 76.0 6.73e-01 100.0% 89.3%
3789624 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.82 77.0 6.94e-01 100.0% 89.3%
4939065 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 77.0 7.37e-01 100.0% 90.0%
4059128 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 77.0 7.36e-01 100.0% 90.0%
3291440 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.81 70.0 6.96e-01 100.0% 89.1%
3387590 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.81 73.0 7.16e-01 100.0% 89.6%
4936049 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 76.0 7.30e-01 100.0% 90.0%
4980359 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 76.0 7.28e-01 100.0% 90.0%
3719938 227.1.1.17 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_N 0.81 76.0 6.83e-01 100.0% 89.3%
5059299 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 75.0 7.23e-01 100.0% 90.0%
5039026 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.80 73.0 7.05e-01 100.0% 87.5%
1871497 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.76 69.0 6.67e-01 100.0% 89.1%