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putative_protease

Euk-Vir

Hubei_leech_virus_1

putative_protease__YP_009336873__Hubei_leech_virus_1__1922899

Identity

Accession:
YP_009336873 ↗
Protein ID:
putative_protease
Kingdom:
euk

Quality

50.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 281-476
PDB
Domain cluster: rep: 100_kDa_protein__YP_008130303__Citrus_vein_enation_virus__1301220__D379-571
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.79 73.0 7.22e-01 96.4% 96.6%
4ri0A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.77 71.0 7.12e-01 96.4% 94.9%
2ijd101 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.77 68.0 7.08e-01 95.9% 100.0%
1lvmA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 35.0 4.77e-01 89.3% 86.8%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 39.0 5.14e-01 94.4% 91.3%
3tk9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 40.0 5.31e-01 90.3% 99.1%
2bhgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 37.0 5.10e-01 78.6% 99.0%
4b6eB01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.67 59.0 5.89e-01 94.4% 88.6%
4kkdB04 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 42.0 5.22e-01 90.3% 100.0%
2i02A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 30.0 3.53e-01 88.3% 73.6%
2q9kA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 38.0 4.27e-01 89.8% 94.6%
2hq9B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 31.0 3.61e-01 87.8% 80.3%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.52 32.0 3.89e-01 77.0% 96.7%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
134018 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.88 71.0 7.87e-01 98.5% 100.0%
3989070 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.85 76.0 7.29e-01 92.3% 96.3%
3448847 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.84 81.0 7.04e-01 100.0% 100.0%
1096110 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.83 74.0 7.17e-01 92.3% 90.7%
3497558 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.83 74.0 6.69e-01 92.9% 95.7%
None — 0.83 74.0 7.20e-01 92.9% 92.6%
2526961 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.83 74.0 7.11e-01 92.9% 90.5%
3401130 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.83 74.0 6.79e-01 92.9% 95.9%
None — 0.83 74.0 7.14e-01 92.9% 90.8%
4205419 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.83 76.0 7.16e-01 95.9% 93.9%
3969739 1.1.17.9 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › PF30586 0.82 76.0 7.02e-01 95.9% 95.8%
3856305 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.82 73.0 6.86e-01 92.9% 92.7%
None — 0.82 73.0 7.11e-01 92.9% 91.5%
4453816 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 78.0 6.66e-01 99.5% 93.4%
5063379 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.81 72.0 7.56e-01 93.9% 100.0%
3900731 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.81 77.0 6.77e-01 100.0% 97.8%
3530898 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.81 77.0 6.68e-01 100.0% 95.0%
3816593 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.81 77.0 7.35e-01 99.5% 98.6%
3969197 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 76.0 6.78e-01 100.0% 96.2%
3633439 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.80 73.0 6.45e-01 95.4% 96.3%
3448106 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 76.0 6.87e-01 98.5% 92.8%
3280955 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 75.0 7.12e-01 98.5% 95.1%
3284072 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.79 73.0 6.80e-01 96.4% 91.6%
4881914 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.79 69.0 6.89e-01 91.3% 100.0%
5063188 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.79 73.0 7.06e-01 96.4% 92.1%
3408736 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 72.0 6.45e-01 96.4% 87.9%
3532116 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.79 73.0 7.07e-01 96.9% 94.0%
4169622 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.79 73.0 7.01e-01 96.9% 91.8%
3184103 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.78 68.0 6.16e-01 90.8% 99.6%
4324118 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.78 72.0 6.70e-01 96.4% 96.2%
4600945 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.78 73.0 6.95e-01 96.4% 93.2%
1308507 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.78 68.0 6.95e-01 96.4% 94.1%
4587424 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 71.0 6.77e-01 94.4% 97.7%
3659932 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.78 73.0 6.67e-01 98.0% 94.4%
3221539 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.78 70.0 6.15e-01 94.4% 88.9%
140973 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.78 74.0 6.99e-01 99.5% 89.0%
3580932 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 70.0 6.25e-01 94.4% 94.0%
3435448 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.78 72.0 6.66e-01 96.9% 100.0%
3377696 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.77 71.0 7.09e-01 96.4% 100.0%
3432441 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.77 73.0 6.55e-01 98.5% 89.4%
3443528 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.77 72.0 7.00e-01 98.5% 96.3%
3401129 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 69.0 6.44e-01 93.9% 96.6%
3957702 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.77 51.0 6.06e-01 77.0% 97.0%
3950281 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.77 73.0 6.93e-01 100.0% 93.3%
3447771 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.76 71.0 6.62e-01 98.5% 95.4%
3433009 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.76 71.0 6.45e-01 98.0% 80.4%
3436414 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.76 71.0 6.98e-01 98.0% 95.2%
5037776 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.76 66.0 6.37e-01 90.8% 95.5%
4028981 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.76 71.0 6.78e-01 97.4% 96.4%
257 1.1.5.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C4 0.76 70.0 6.75e-01 99.0% 86.8%
5072499 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.76 71.0 7.09e-01 98.0% 97.0%
3428386 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.76 70.0 6.35e-01 96.4% 80.0%
3504702 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 64.0 6.07e-01 87.8% 96.9%
2512790 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.75 71.0 6.60e-01 100.0% 99.2%
3907134 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 67.0 6.45e-01 93.9% 97.3%
22087 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.75 71.0 6.51e-01 100.0% 99.2%
3546177 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 67.0 6.25e-01 93.9% 93.2%
3739220 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.75 67.0 6.49e-01 93.9% 96.3%
3672433 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.74 59.0 5.12e-01 82.7% 94.8%
3066474 1.1.17.2 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.74 68.0 6.67e-01 96.4% 98.1%
3417330 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.73 67.0 6.51e-01 96.4% 93.5%
3443107 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.71 67.0 6.41e-01 100.0% 93.3%
3165269 1.1.5.13 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 0.71 66.0 5.78e-01 98.0% 84.7%
4092486 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.60 48.0 5.03e-01 94.4% 92.8%
3953729 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.55 31.0 3.89e-01 93.9% 89.2%
3290558 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.53 31.0 3.41e-01 91.3% 69.7%
4125768 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.52 32.0 3.63e-01 87.8% 79.3%
D2 medium residues 2-81_105-123
PDB