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putative_protein_P2

Euk-Vir

Tobacco_vein_distorting_virus

putative_protein_P2__YP_001931931__Tobacco_vein_distorting_virus__192203

Identity

Accession:
YP_001931931 ↗
Protein ID:
putative_protein_P2
Kingdom:
euk

Quality

74.9 mean pLDDT

Cluster

View cluster (38 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 114-205
PDB
D2 medium residues 206-227_314-346_348-423_425-429
PDB
Domain cluster: rep: hypothetical_protein_1__YP_009337259__Shuangao_sobemo-like_virus_2__1923475__D83-106_193-282
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02122.22 best Peptidase_S39 126.5 1.50e-36 75.0% 51.2%
D3 medium residues 228-313
PDB
Domain cluster: rep: hypothetical_protein__YP_009825042__Birds-foot_trefoil_enamovirus_1__2283314__D329-413
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02122.22 best Peptidase_S39 96.7 2.00e-27 100.0% 40.4%
D4 medium residues 657-685_707-823
PDB
Domain cluster: rep: replicase_polyprotein__YP_009465710__Pepper_enamovirus__2073163__D698-776_892-917
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02123.22 best RdRP_4 83.4 2.30e-23 98.0% 32.9%
D5 medium residues 686-706_824-861_897-947_949-961
PDB
Domain cluster: rep: NIb__YP_006908987__Rose_yellow_mosaic_virus__1048434__D1-17_73-106_202-219_246-320
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF02123.22 best RdRP_4 48.0 1.30e-12 56.1% 17.8%
PF02123.22 RdRP_4 30.8 2.20e-07 46.3% 9.2%
D6 medium residues 1031-1055_1057-1076_1079-1084
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3731002 109.4.1.1215 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HET 0.54 42.0 2.77e-01 90.2% 44.5%