putative_replication_factor

Euk-Vir

Epizootic_haematopoietic_necrosis_virus

putative_replication_factor__YP_009182099__Epizootic_haematopoietic_necrosis_virus__100217

Identity

72.3 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Ranavirus› Epizootic_haematopoietic_necrosis_virus

TaxID: 100217

View cluster (16 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 113-171

PDB

Domain cluster: rep: late_transcription_factor_VLTF3__YP_008052476__Phaeocystis_globosa_virus__251749__D211-280

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04947.20 best	Pox_VLTF3	49.5	5.60e-13	100.0%	29.2%

D2 high residues 176-249

PDB

Domain cluster: rep: putative_transcription_factor_A2-like_protein__YP_004347315__Lausannevirus__999883__D263-338

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04947.20 best	Pox_VLTF3	60.7	2.10e-16	100.0%	46.4%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2v79A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.60	50.0	4.47e-01	100.0%	86.1%
2be4A02	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.56	39.0	3.60e-01	73.0%	53.5%
4ivnA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.55	41.0	4.10e-01	83.8%	77.6%
2xubA05	6.10.140.1450	Special › Helix non-globular › Helix Hairpins ›	0.55	38.0	3.53e-01	73.0%	58.3%
1td6A03	1.10.472.40	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Hypothetical protein mg237 homolog; domain 3	0.52	41.0	3.85e-01	100.0%	70.7%
2f48A03	1.10.10.480	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphofructokinase; domain 3	0.52	36.0	3.60e-01	71.6%	70.7%
4uavA02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.52	41.0	4.02e-01	90.5%	89.4%
2riqA01	1.10.20.130	Mainly Alpha › Orthogonal Bundle › Histone, subunit A ›	0.51	40.0	4.20e-01	100.0%	92.4%
5af7B03	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.50	40.0	3.20e-01	86.5%	63.5%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4236554	101.1.2.244 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_21	0.89	40.0	4.52e-01	97.3%	56.7%
3933575	186.1.1.0 ↗	alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N	0.77	45.0	4.49e-01	100.0%	57.3%
3251657	142.1.1.5 ↗	alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SRI	0.65	39.0	3.85e-01	98.6%	56.2%
4968502	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.61	41.0	4.43e-01	78.4%	85.0%
4025910	102.1.1.0 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like	0.54	43.0	4.06e-01	93.2%	85.3%
2756446	5069.1.1.5 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cyt_bd_oxida_II	0.53	45.0	3.56e-01	98.6%	61.8%
4014996	7094.1.1.0 ↗	alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin	0.51	36.0	3.37e-01	77.0%	62.0%
3419173	108.1.1.28 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7	0.51	36.0	3.29e-01	75.7%	57.9%