putative_replication_factor

Euk-Vir

Common_midwife_toad_virus

putative_replication_factor__YP_009508629__Common_midwife_toad_virus__540070

Identity

70.1 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Ranavirus› Common_midwife_toad_virus

TaxID: 540070

View cluster (16 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-40_106-171

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04947.20 best	Pox_VLTF3	58.7	8.30e-16	74.3%	34.5%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1xb4B01	1.10.10.570	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1"	0.54	38.0	3.79e-01	93.1%	71.2%
3w6wB01	1.10.1280.10	Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase	0.54	40.0	2.69e-01	79.2%	79.2%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4190759	621.1.1.3 ↗	alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB	0.54	42.0	3.26e-01	83.2%	57.7%
3338519	101.1.2.77 ↗	alpha arrays › HTH › HTH › winged helix domain › ESCRT-II	0.50	35.0	3.62e-01	96.0%	76.8%

D2 high residues 176-249

PDB

Domain cluster: rep: putative_transcription_factor_A2-like_protein__YP_004347315__Lausannevirus__999883__D263-338

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04947.20 best	Pox_VLTF3	60.4	2.50e-16	100.0%	46.4%