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putative_silencing_suppressor
Euk-VirBlackberry_vein_banding-associated_virus
putative_silencing_suppressor__YP_008411017__Blackberry_vein_banding-associated_virus__1381464
Identity
- Accession:
- YP_008411017 ↗
- Protein ID:
- putative_silencing_suppressor
- Kingdom:
- euk
Quality
69.5
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Martellivirales›
Closteroviridae›
Ampelovirus›
Blackberry_vein_banding-associated_virus
TaxID: 1381464
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-56
D2
high
residues 65-111_127-176
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.52 | 32.0 | 3.80e-01 | 79.4% | 89.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5048713 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.56 | 48.0 | 3.43e-01 | 96.9% | 59.7% |
| 5052692 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.54 | 45.0 | 3.08e-01 | 92.8% | 44.4% |
| 5002275 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.53 | 46.0 | 3.44e-01 | 100.0% | 74.8% |