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putative_thymidine_kinase

Euk-Vir

Cafeteria_roenbergensis_virus_BV-PW1

putative_thymidine_kinase__YP_003969793__Cafeteria_roenbergensis_virus_BV-PW1__693272

Identity

Accession:
YP_003969793 ↗
Protein ID:
putative_thymidine_kinase
Kingdom:
euk

Quality

84.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Rheavirus› Cafeteria_roenbergensis_virus_BV-PW1

TaxID: 693272

Cluster

View cluster (85 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-128
PDB
Domain cluster: rep: NC_021330__YP_008059651.1__M202-gp129__00089__D21-171
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00265.25 best TK 105.0 5.80e-30 99.2% 74.4%
CATH (87)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2orwB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.89 83.0 8.36e-01 100.0% 96.9%
1w4rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.85 82.0 8.07e-01 100.0% 97.0%
2b8tA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.82 79.0 7.57e-01 100.0% 97.1%
4idhA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 70.0 5.85e-01 100.0% 74.5%
3upuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 68.0 6.04e-01 100.0% 83.5%
1w36C01 3.40.50.10930 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.72 66.0 5.48e-01 100.0% 99.1%
4ceiB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 66.0 5.86e-01 100.0% 98.9%
4tl8F00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 66.0 5.51e-01 100.0% 69.0%
6x50A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 65.0 5.45e-01 98.4% 71.9%
3vkwA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 64.0 6.19e-01 100.0% 95.1%
4ljyA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 63.0 5.46e-01 100.0% 87.4%
3bosB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 61.0 5.53e-01 100.0% 72.8%
6jimB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 63.0 6.07e-01 100.0% 88.1%
1z3iX01 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.68 62.0 4.82e-01 100.0% 78.3%
1ofuX00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 52.0 5.42e-01 81.0% 97.5%
8ea4D01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 63.0 5.78e-01 100.0% 88.7%
3afmB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 54.0 4.45e-01 87.3% 97.4%
3rc3A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 63.0 5.75e-01 100.0% 89.9%
4zcfC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 62.0 4.86e-01 100.0% 70.1%
2ewvA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 62.0 4.92e-01 100.0% 58.5%
4ao8A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.66 52.0 4.25e-01 83.3% 72.2%
4crwB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 60.0 5.58e-01 100.0% 96.2%
7r7jA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 60.0 5.25e-01 100.0% 85.5%
2i3bA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 60.0 5.24e-01 100.0% 87.3%
4imrB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 56.0 4.50e-01 93.7% 66.8%
4ns4A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.66 51.0 4.02e-01 83.3% 75.6%
6cv6D00 3.40.50.9100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dehydroquinase, class II 0.65 52.0 4.96e-01 84.1% 87.5%
5f2hA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.65 50.0 4.47e-01 81.7% 86.1%
6jh7B00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 55.0 4.40e-01 93.7% 65.3%
4j3fA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 55.0 4.42e-01 94.4% 67.2%
3stuB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.65 51.0 4.05e-01 84.1% 88.8%
3eccA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 60.0 5.46e-01 100.0% 84.0%
1h5qA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 55.0 4.36e-01 93.7% 68.8%
3hdgA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 48.0 4.89e-01 84.1% 80.6%
2j48A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 48.0 4.98e-01 82.5% 84.0%
1w6uD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 55.0 4.24e-01 93.7% 84.8%
4nicA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 47.0 4.90e-01 82.5% 83.8%
1d5wA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 49.0 5.04e-01 84.1% 83.7%
3kxpA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.63 50.0 3.93e-01 84.1% 83.2%
4pioA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 55.0 4.90e-01 95.2% 90.1%
3c5vA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.63 50.0 3.81e-01 84.1% 76.9%
3cfyA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 48.0 4.77e-01 83.3% 77.7%
4fc7D00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 53.0 4.20e-01 93.7% 62.9%
5lddC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 49.0 4.46e-01 83.3% 84.5%
1dwoA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 50.0 3.96e-01 85.7% 87.4%
3kloA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 49.0 4.70e-01 84.9% 88.2%
1sqsA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.62 48.0 3.99e-01 83.3% 65.4%
4q7eA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 48.0 4.86e-01 84.9% 90.4%
4d02A02 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.60 46.0 4.44e-01 81.0% 82.5%
4rheC00 3.40.50.1950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like 0.60 51.0 4.46e-01 95.2% 75.6%
3ni2A01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.60 51.0 3.55e-01 93.7% 34.0%
2p4gA00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.60 53.0 4.32e-01 100.0% 88.7%
4kzpB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 52.0 4.10e-01 99.2% 80.2%
2jjmA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.59 51.0 4.54e-01 94.4% 71.1%
4u63A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 43.0 3.91e-01 76.2% 66.1%
1p3y100 3.40.50.1950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like 0.59 51.0 4.62e-01 95.2% 78.4%
3g5jA00 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.59 45.0 4.54e-01 81.7% 91.5%
1yqeA02 3.40.50.10700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like 0.59 41.0 4.61e-01 83.3% 94.8%
2gzsA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 46.0 3.72e-01 84.1% 74.7%
4d8lA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.58 48.0 3.68e-01 89.7% 82.7%
1g0nB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 48.0 3.94e-01 93.7% 87.8%
4ex8A00 3.40.1790.10 Alpha Beta › 3-Layer(aba) Sandwich › Indigoidine synthase fold › Indigoidine synthase domain 0.57 44.0 3.43e-01 83.3% 54.5%
3cf4A02 3.40.50.2030 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 49.0 4.24e-01 94.4% 65.3%
3lucA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 45.0 4.55e-01 84.9% 95.3%
3majA01 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 49.0 3.85e-01 98.4% 54.9%
2icsA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.56 49.0 3.94e-01 99.2% 95.5%
3op1A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 42.0 3.79e-01 81.0% 71.4%
2yhaA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 44.0 4.26e-01 83.3% 87.8%
1jmvA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 41.0 4.05e-01 79.4% 91.4%
1mgpA01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 43.0 4.04e-01 83.3% 98.1%
3v75A01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 48.0 3.76e-01 96.8% 94.9%
3jr7A01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.55 43.0 4.48e-01 83.3% 95.8%
3nntA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 49.0 3.92e-01 100.0% 87.5%
4jbeA02 3.40.309.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 0.54 48.0 4.71e-01 100.0% 93.6%
3r89A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 46.0 3.59e-01 96.0% 92.0%
2g7zA01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 42.0 3.97e-01 84.9% 99.4%
2qg6A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 47.0 4.22e-01 100.0% 85.2%
3e2jA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.53 41.0 3.70e-01 83.3% 64.0%
1vlpA00 3.20.140.10 Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase 0.52 45.0 3.20e-01 97.6% 43.1%
3cx3B01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.52 41.0 3.83e-01 83.3% 76.0%
4x9xA01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 40.0 3.85e-01 83.3% 98.7%
3f2bA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.52 43.0 3.49e-01 92.1% 96.0%
1losA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 46.0 3.87e-01 100.0% 93.5%
2hnhA01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.51 45.0 3.60e-01 99.2% 95.9%
4xfjB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 43.0 3.93e-01 95.2% 79.8%
1kqpA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 45.0 3.53e-01 100.0% 53.5%
3loqA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 43.0 4.35e-01 100.0% 93.8%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3674153 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.95 92.0 7.33e-01 100.0% 67.7%
4248117 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.93 90.0 8.65e-01 100.0% 93.6%
4174362 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.93 90.0 8.23e-01 100.0% 85.2%
4081305 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.93 90.0 7.57e-01 100.0% 68.9%
4581964 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.93 89.0 7.87e-01 100.0% 96.5%
3605422 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.92 89.0 8.14e-01 100.0% 83.9%
4423010 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.91 88.0 8.27e-01 100.0% 91.7%
4462630 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.91 87.0 7.22e-01 100.0% 64.7%
4527075 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.91 86.0 8.31e-01 100.0% 95.7%
3976549 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.90 86.0 7.13e-01 100.0% 66.8%
4007998 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.90 86.0 7.13e-01 100.0% 66.8%
4628796 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.88 84.0 7.72e-01 100.0% 89.7%
3588920 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.88 83.0 8.00e-01 100.0% 96.4%
5058382 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.88 83.0 7.90e-01 100.0% 92.4%
4165287 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.87 83.0 6.94e-01 100.0% 68.0%
3717094 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.86 83.0 6.60e-01 100.0% 57.8%
4991383 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.85 81.0 7.07e-01 100.0% 74.7%
4968084 2004.1.1.343 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 0.76 64.0 5.22e-01 100.0% 50.5%
4959001 2004.1.1.343 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 0.76 64.0 5.37e-01 100.0% 54.6%
4007160 2004.1.1.123 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_RecD 0.76 68.0 5.89e-01 100.0% 64.9%
3388291 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.76 59.0 6.00e-01 100.0% 82.4%
3163557 2004.1.1.123 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_RecD 0.74 69.0 5.99e-01 100.0% 68.6%
4989911 2004.1.1.233 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cas3-like_C_2 0.73 67.0 4.57e-01 100.0% 41.8%
4937848 2004.1.1.343 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 0.73 64.0 5.27e-01 100.0% 54.9%
3444352 2004.1.1.120 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.72 66.0 4.83e-01 100.0% 55.7%
3924486 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.71 66.0 4.37e-01 100.0% 49.8%
4162292 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.70 65.0 5.02e-01 100.0% 56.7%
4679476 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.70 59.0 4.56e-01 88.9% 57.0%
5059467 2004.1.1.343 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 0.70 65.0 5.05e-01 100.0% 49.0%
4556018 2004.1.1.364 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.70 65.0 4.26e-01 100.0% 30.5%
None — 0.70 65.0 3.88e-01 100.0% 18.9%
5077161 2004.1.1.343 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 0.70 63.0 5.09e-01 100.0% 53.0%
3170901 2004.1.1.364 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.70 64.0 4.26e-01 100.0% 41.9%
4990771 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.70 63.0 4.61e-01 100.0% 37.8%
4537134 2004.1.1.123 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_RecD 0.70 65.0 5.39e-01 100.0% 71.4%
5078032 2004.1.1.343 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 0.68 63.0 5.02e-01 100.0% 52.3%
3970059 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 61.0 3.99e-01 96.0% 31.0%
3985831 2004.1.1.719 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD, Helicase_C, SecA_DEAD, RecG_dom3_C 0.68 60.0 3.97e-01 96.0% 31.0%
3821734 2004.1.1.364 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.68 60.0 4.04e-01 96.8% 31.5%
4549410 506.2.1.0 ↗ beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain 0.68 60.0 3.59e-01 96.8% 17.2%
3315112 2004.1.1.364 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.68 60.0 4.09e-01 96.8% 34.2%
3976352 2004.1.1.120 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.68 62.0 4.94e-01 100.0% 81.6%
3388362 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 60.0 3.73e-01 96.8% 21.6%
3278181 2004.1.1.33 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C,RecQ_Zn_bind 0.67 60.0 5.18e-01 100.0% 97.5%
4506752 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.66 59.0 4.21e-01 100.0% 33.9%
4968277 2004.1.1.343 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 0.66 62.0 5.14e-01 100.0% 60.0%
None — 0.66 57.0 4.51e-01 94.4% 76.1%
5049542 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.66 52.0 5.16e-01 83.3% 80.0%
3933239 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.66 60.0 5.49e-01 100.0% 93.3%
4025947 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.66 57.0 4.93e-01 95.2% 74.5%
3783664 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.66 58.0 5.18e-01 100.0% 69.4%
3732082 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.66 57.0 4.19e-01 94.4% 89.7%
5033547 2007.1.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.66 51.0 5.06e-01 83.3% 85.9%
4502425 2004.1.1.196 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.66 61.0 5.31e-01 100.0% 85.4%
4953429 2003.1.1.31 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CbiJ 0.65 51.0 5.05e-01 82.5% 91.9%
3175384 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.65 58.0 4.61e-01 97.6% 69.6%
3495611 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 53.0 4.67e-01 91.3% 93.8%
4943043 2007.1.3.71 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PAS_4 0.64 49.0 4.93e-01 83.3% 79.2%
3924124 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.64 55.0 4.26e-01 95.2% 82.4%
4326242 2003.1.1.31 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CbiJ 0.64 49.0 4.92e-01 80.2% 97.6%
4103302 2007.1.3.58 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PF29701 0.64 50.0 5.10e-01 83.3% 85.8%
4868275 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.64 48.0 4.93e-01 83.3% 83.3%
4234884 2007.1.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.63 49.0 4.82e-01 84.1% 77.0%
4939011 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.63 48.0 4.89e-01 84.1% 82.4%
None — 0.63 54.0 4.30e-01 95.2% 95.5%
1867152 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.63 46.0 4.79e-01 84.1% 83.1%
4340939 2003.1.8.4 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › MurD-like_N 0.62 44.0 4.78e-01 93.7% 91.0%
4072041 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.62 48.0 4.65e-01 83.3% 72.4%
4209848 2004.1.1.108 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SulA 0.62 49.0 4.70e-01 86.5% 80.7%
4964424 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.62 47.0 4.64e-01 83.3% 74.8%
5050601 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.62 48.0 4.60e-01 83.3% 71.7%
3979167 2007.1.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.61 46.0 4.62e-01 85.7% 80.0%
4616152 2004.1.1.233 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cas3-like_C_2 0.60 53.0 4.75e-01 97.6% 81.7%
3923686 7590.1.1.6 ↗ a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › ArgoMid 0.58 47.0 4.32e-01 84.9% 75.6%
5070945 7522.1.1.4 ↗ a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › PFOR_II 0.58 44.0 4.48e-01 82.5% 82.5%
3933775 7590.1.1.0 ↗ a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.58 46.0 4.29e-01 84.9% 75.6%
None — 0.57 50.0 4.09e-01 100.0% 50.4%
4176786 2002.1.1.102 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.56 48.0 3.63e-01 92.9% 94.4%
3793098 7590.1.1.2 ↗ a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi 0.56 45.0 4.11e-01 84.1% 78.8%
5073965 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.56 47.0 4.00e-01 95.2% 83.8%
4226067 2002.1.1.102 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.56 47.0 3.69e-01 92.9% 94.2%
3626270 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.54 44.0 3.41e-01 87.3% 56.0%
4403465 2007.1.19.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › SAT 0.53 42.0 3.36e-01 85.7% 96.6%
3490628 2484.1.1.7 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_S11 0.52 36.0 3.63e-01 72.2% 82.2%
3944042 2003.1.1.31 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CbiJ 0.52 45.0 4.50e-01 100.0% 93.1%
4961220 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.51 44.0 4.24e-01 95.2% 91.7%
4954782 2007.1.14.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like 0.51 40.0 4.24e-01 89.7% 97.3%
D2 high residues 131-181
PDB
Domain cluster: rep: Thymidine_kinase__YP_009703106__African_swine_fever_virus__10497__D144-190
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00265.25 best TK 29.1 1.20e-06 82.3% 21.0%
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w4rA02 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.94 72.0 7.85e-01 88.2% 97.6%
4e1pA00 3.30.60.230 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain 0.83 63.0 6.16e-01 100.0% 74.5%
1xx6A02 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.73 58.0 6.19e-01 100.0% 97.8%
2kumA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 35.0 3.39e-01 80.4% 49.1%
2jrjA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.57 40.0 3.99e-01 96.1% 73.1%
5i0hA02 1.20.5.4820 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.56 44.0 3.93e-01 86.3% 95.8%
1owqA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.53 39.0 3.61e-01 80.4% 69.1%
1b3tA00 3.30.70.390 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Epstein Barr virus nuclear antigen-1, DNA-binding domain 0.51 41.0 3.03e-01 92.2% 58.5%
4eadA03 3.90.1170.30 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Pyrimidine nucleoside phosphorylase-like, C-terminal domain 0.51 42.0 3.51e-01 98.0% 88.7%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4517886 377.1.1.3 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK 0.92 76.0 8.06e-01 96.1% 100.0%
3717094 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.91 80.0 5.05e-01 100.0% 21.3%
1868224 377.1.1.3 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK 0.91 78.0 7.32e-01 98.0% 77.0%
4355340 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.86 77.0 7.56e-01 98.0% 96.4%
4675823 377.1.1.3 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK 0.86 77.0 7.05e-01 98.0% 78.5%
4007998 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.86 77.0 4.98e-01 98.0% 24.9%
3976549 2004.1.1.28 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.83 74.0 4.80e-01 98.0% 24.9%
4093322 377.1.1.3 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK 0.83 74.0 6.45e-01 100.0% 67.1%
163182 377.1.1.3 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK 0.82 72.0 7.22e-01 94.1% 94.1%
3588905 377.1.1.3 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK 0.80 70.0 7.07e-01 98.0% 98.0%
4404465 377.1.1.88 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH 0.77 70.0 6.42e-01 98.0% 78.5%
5013313 377.1.3.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.71 46.0 5.21e-01 90.2% 97.1%
3408969 377.9.1.8 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS 0.62 44.0 4.10e-01 100.0% 58.6%
5025566 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.60 45.0 4.41e-01 80.4% 80.0%
3391714 377.1.1.18 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-AD 0.59 52.0 4.49e-01 100.0% 82.5%
3664706 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.57 44.0 3.69e-01 84.3% 88.2%
5032498 304.160.1.1 ↗ a+b two layers › Alpha-beta plaits › Gas vesicle protein GvpF › Gas vesicle protein GvpF › GvpL_GvpF 0.56 41.0 3.00e-01 80.4% 82.9%
4888772 2.21.1.0 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.55 30.0 1.87e-01 92.2% 9.7%
5027561 310.3.1.3 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PilN 0.53 35.0 2.62e-01 94.1% 28.0%
3276783 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 42.0 3.12e-01 92.2% 77.0%
3786228 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.51 44.0 4.25e-01 100.0% 88.3%