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putative_transcription_termination_factor
Euk-VirAcanthamoeba_polyphaga_mimivirus
putative_transcription_termination_factor__YP_003986853__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003986853 ↗
- Protein ID:
- putative_transcription_termination_factor
- Kingdom:
- euk
Quality
70.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
View cluster (106 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 51-61_79-316_662-704
Domain cluster:
rep: HQ123590.1__ADW08988.1__CN77-20-1__00001__D9-139_144-252
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00176.30 best | SNF2-rel_dom | 47.9 | 1.40e-12 | 92.1% | 78.8% |
| PF04851.22 | ResIII | 38.6 | 1.50e-09 | 60.6% | 90.8% |
| PF00270.36 | DEAD | 26.1 | 8.80e-06 | 57.9% | 84.4% |
D2
high
residues 740-805
D3
medium
residues 485-650
Domain cluster:
rep: OQ622096.1__WGH28569.1__13VV501A_gene0073__00071__D542-667
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00271.38 best | Helicase_C | 32.3 | 1.40e-07 | 76.5% | 86.4% |