putative_viral_replicase

Euk-Vir

Prune_dwarf_virus

putative_viral_replicase__YP_611154__Prune_dwarf_virus__33760

Identity

73.3 mean pLDDT

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Bromoviridae› Ilarvirus› Prune_dwarf_virus

TaxID: 33760

View cluster (13 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 630-746

PDB

Domain cluster: rep: replication-associated_polyprotein_1a__YP_009165996__Privet_ringspot_virus__2169960__D691-782

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3vkwA01	3.30.450.420	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase ›	0.81	69.0	6.26e-01	100.0%	69.3%
2xzmH02	3.30.1490.10	Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 ›	0.55	28.0	3.68e-01	82.1%	91.8%
4exoA00	3.30.450.20	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain	0.54	48.0	4.49e-01	98.3%	98.6%
2h5eA01	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.52	37.0	3.32e-01	71.8%	58.5%
1ng5B00	2.40.260.10	Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase	0.50	37.0	3.10e-01	76.1%	82.5%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2577490	1.1.7.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C	0.59	29.0	3.98e-01	79.5%	100.0%
3956757	223.1.1.0 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains	0.54	41.0	4.53e-01	86.3%	100.0%
4940958	223.8.1.0 ↗	a+b three layers › Profilin-like › LapD periplasmic domain › LapD periplasmic domain	0.53	41.0	4.47e-01	83.8%	100.0%
3630272	389.1.2.1 ↗	few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi	0.53	24.0	2.88e-01	70.9%	62.7%
3440014	101.1.2.687 ↗	alpha arrays › HTH › HTH › winged helix domain › Methyltransf_11	0.50	36.0	3.46e-01	76.9%	79.3%

D2 high residues 747-898

PDB

Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01443.25 best	Viral_helicase1	101.3	1.10e-28	87.5%	52.2%
PF13245.13	AAA_19	25.4	2.00e-05	82.2%	96.3%

D3 high residues 922-1052

PDB

Domain cluster: rep: methyltransferase-helicase__YP_009551567__Tea_plant_line_pattern_virus__2419940__D883-1037

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01443.25 best	Viral_helicase1	52.6	7.70e-14	79.4%	30.7%

D4 medium residues 11-46

PDB

D5 medium residues 103-186

PDB

Domain cluster: rep: RNA_replicase_component__YP_005476601__Ribgrass_mosaic_virus__51680__D99-209

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01660.23 best	Vmethyltransf	64.9	9.20e-18	100.0%	25.7%

D6 medium residues 363-432

PDB