putative_viral_replication_protein

Euk-Vir

Acartia_tonsa_copepod_circovirus

putative_viral_replication_protein__YP_007353980__Acartia_tonsa_copepod_circovirus__1168547

Identity

70.5 mean pLDDT

Shotokuvirae› Cressdnaviricota› Arfiviricetes› Cirlivirales› Circoviridae› Circovirus› Acartia_tonsa_copepod_circovirus

TaxID: 1168547

View cluster (114 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 214-346

PDB

Domain cluster: rep: replication-associated_protein__YP_009001745__Dragonfly_larvae_associated_circular_virus-5_Viruses.__X__D171-266

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00910.29 best	RNA_helicase	45.3	1.50e-11	66.9%	98.1%

D2 medium residues 42-56_86-159

PDB

Domain cluster: rep: replication-associated_protein__YP_009551390__Fly_associated_circular_virus_6__2293286__D5-105

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02407.23 best	Viral_Rep	77.5	1.10e-21	84.3%	98.8%

D3 medium residues 168-204

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5h80B03	3.30.470.20	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain	0.61	45.0	2.73e-01	78.4%	12.4%
1a0cA00	3.20.20.150	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes	0.57	44.0	2.56e-01	97.3%	11.9%
2xuaA00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.55	39.0	2.53e-01	97.3%	15.8%