putative_viron_protein

Euk-Vir

Human_betaherpesvirus_6B

putative_viron_protein__NP_050255__Human_betaherpesvirus_6B__32604

Identity

72.9 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Roseolovirus› Human_betaherpesvirus_6B

TaxID: 32604

View cluster (76 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 63-87_177-199_238-289

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01763.23 best	Herpes_UL6	28.1	1.10e-06	55.0%	9.5%
PF01763.23	Herpes_UL6	33.5	2.40e-08	39.0%	6.2%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4fw1A02	2.30.30.10	Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral	0.75	25.0	3.38e-01	75.0%	55.6%
5i4eA01	2.30.30.360	Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal	0.60	24.0	3.51e-01	74.0%	82.6%
1mhnA00	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.56	29.0	3.52e-01	79.0%	81.4%
4xcmA02	3.90.1720.10	Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme)	0.53	40.0	3.75e-01	80.0%	100.0%
1igqB00	2.30.30.150	Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain	0.52	25.0	3.17e-01	94.0%	78.9%
6q3wD01	3.30.230.10	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 ›	0.51	39.0	3.23e-01	84.0%	79.7%
1pieA01	3.30.230.10	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 ›	0.50	39.0	3.13e-01	85.0%	67.8%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4058174	4.1.1.97 ↗	beta barrels › SH3 › SH3 › SH3 › DUF150_C	0.59	25.0	3.12e-01	76.0%	61.5%
3576438	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.51	28.0	2.92e-01	91.0%	55.6%
4290004	10.1.1.21 ↗	beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › 3keto-disac_hyd	0.51	42.0	3.57e-01	90.0%	88.5%
3741046	5.1.4.348 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_1st	0.51	35.0	2.39e-01	71.0%	78.0%

D2 medium residues 88-176

PDB

Domain cluster: rep: capsid_portal_protein__NP_612735__Panine_betaherpesvirus_2__188763__D81-165

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01763.23 best	Herpes_UL6	72.2	4.40e-20	100.0%	17.2%

D3 medium residues 290-338_498-525

PDB

Domain cluster: rep: protein_UL104__YP_004933881__Cynomolgus_macaque_cytomegalovirus_strain_Ottawa__944969__D284-323_496-523

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01763.23 best	Herpes_UL6	53.9	1.50e-14	63.6%	9.0%
PF01763.23	Herpes_UL6	33.9	1.80e-08	37.7%	5.1%