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putative_zinc_finger_protein
Euk-VirMelbournevirus
putative_zinc_finger_protein__YP_009094787__Melbournevirus__1560514
Identity
- Accession:
- YP_009094787 ↗
- Protein ID:
- putative_zinc_finger_protein
- Kingdom:
- euk
Quality
63.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Marseillevirus_sp._'Melbournevirus'
TaxID: 1560514
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 83-234
D2
medium
residues 362-458
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3t46A00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.60 | 39.0 | 4.35e-01 | 76.3% | 84.0% |
| 2wl8C00 | 1.20.120.900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pex19, mPTS binding domain | 0.56 | 42.0 | 4.09e-01 | 80.4% | 96.3% |
| 2uxwA04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 42.0 | 3.81e-01 | 79.4% | 69.2% |
| 2pq7A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.55 | 48.0 | 3.97e-01 | 97.9% | 72.8% |
| 2qgnA02 | 1.10.287.890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 0.54 | 34.0 | 3.64e-01 | 74.2% | 74.4% |
| 3n98A02 | 1.20.1430.10 | Mainly Alpha › Up-down Bundle › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase, middle domain | 0.53 | 45.0 | 4.07e-01 | 94.8% | 68.7% |
| 5xfaA04 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.52 | 32.0 | 3.40e-01 | 92.8% | 68.2% |
| 5nohA00 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.51 | 40.0 | 3.94e-01 | 84.5% | 81.6% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3287378 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.59 | 43.0 | 3.25e-01 | 79.4% | 70.4% |
| 4979230 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.57 | 42.0 | 3.46e-01 | 78.4% | 95.4% |
| 3934670 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.56 | 50.0 | 4.17e-01 | 100.0% | 90.3% |
| 5051430 | 632.1.1.2 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › BE_C | 0.56 | 48.0 | 4.49e-01 | 94.8% | 80.0% |
| 4019922 | 611.4.1.0 ↗ | alpha bundles › N-cbl like › PG0775 C-terminal domain-like › PG0775 C-terminal domain-like | 0.54 | 46.0 | 3.85e-01 | 95.9% | 87.4% |
| 5005610 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.53 | 41.0 | 4.07e-01 | 82.5% | 100.0% |
| 4596455 | 160.1.1.1 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › ATP-synt_ab_C | 0.52 | 36.0 | 3.28e-01 | 79.4% | 52.3% |
| 3710139 | 604.13.1.0 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like | 0.52 | 37.0 | 3.48e-01 | 75.3% | 78.4% |
| 3708 | 601.1.2.6 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Talin_IBS2B | 0.52 | 40.0 | 3.72e-01 | 82.5% | 91.2% |
| 3181694 | 109.4.1.583 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DNA_pol_phi | 0.50 | 43.0 | 3.25e-01 | 99.0% | 67.0% |
| 4025919 | 101.3.1.2 ↗ | alpha arrays › HTH › XPC-binding domain › XPC-binding domain › STI1-HOP_DP | 0.50 | 32.0 | 3.68e-01 | 75.3% | 91.3% |
| 3682363 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.50 | 43.0 | 3.93e-01 | 95.9% | 74.4% |