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qh_7_scaffold_1_prodigal-single.1__X__X__00162
Bact-Virqh_7_scaffold_1_prodigal-single.1__X__X__00162
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-122
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4750547_curated_closed_complete_prodigal-single.1__X__X__00435__D2-158
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xssA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.67 | 29.0 | 2.71e-01 | 91.8% | 32.1% |
| 3nzpB03 | 1.20.58.930 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 37.0 | 4.44e-01 | 91.0% | 87.3% |
| 2gffA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 39.0 | 4.37e-01 | 86.9% | 78.1% |
| 4dlqA02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 36.0 | 4.00e-01 | 85.2% | 70.5% |
| 2bbeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 39.0 | 4.23e-01 | 86.9% | 73.8% |
| 3kkfA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 38.0 | 4.09e-01 | 84.4% | 69.5% |
| 4dmzA02 | 3.30.70.2880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 38.0 | 3.68e-01 | 86.1% | 53.3% |
| 3m05B01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 39.0 | 4.45e-01 | 77.9% | 83.7% |
| 2nzcB00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.62 | 35.0 | 4.06e-01 | 82.8% | 79.0% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.61 | 44.0 | 4.54e-01 | 88.5% | 78.8% |
| 3bm7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 38.0 | 4.08e-01 | 86.9% | 71.7% |
| 3go9A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.60 | 51.0 | 4.26e-01 | 92.6% | 84.8% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 33.0 | 3.93e-01 | 82.0% | 81.0% |
| 4hl9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 37.0 | 4.13e-01 | 83.6% | 79.8% |
| 4dn9B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 36.0 | 4.01e-01 | 85.2% | 75.3% |
| 3hluA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 31.0 | 3.81e-01 | 78.7% | 83.6% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 34.0 | 3.84e-01 | 81.1% | 76.4% |
| 3pm9A04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 36.0 | 4.12e-01 | 85.2% | 86.2% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 37.0 | 4.00e-01 | 84.4% | 76.2% |
| 4gyvE00 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.58 | 42.0 | 3.55e-01 | 76.2% | 81.4% |
| 4qu7A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 32.0 | 3.74e-01 | 80.3% | 79.0% |
| 2op5B01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 38.0 | 4.16e-01 | 86.9% | 83.0% |
| 3hdiA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.57 | 48.0 | 4.10e-01 | 91.0% | 75.3% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 36.0 | 3.94e-01 | 86.9% | 77.6% |
| 2dhgA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 33.0 | 3.87e-01 | 81.1% | 84.8% |
| 4ehsA00 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.56 | 41.0 | 4.14e-01 | 76.2% | 89.5% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.56 | 41.0 | 4.28e-01 | 86.1% | 82.5% |
| 2mzsA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 32.0 | 3.47e-01 | 82.0% | 66.7% |
| 3smzA03 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 32.0 | 3.50e-01 | 82.0% | 68.0% |
| 4mhlA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.56 | 41.0 | 3.70e-01 | 86.1% | 57.8% |
| 1y1uA01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.55 | 43.0 | 3.64e-01 | 88.5% | 50.8% |
| 2ehwA00 | 6.10.140.1220 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 39.0 | 4.09e-01 | 85.2% | 78.3% |
| 3lk5A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.54 | 46.0 | 3.46e-01 | 95.1% | 99.7% |
| 5zbqA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.54 | 46.0 | 3.47e-01 | 92.6% | 71.8% |
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.53 | 33.0 | 4.05e-01 | 94.3% | 97.4% |
| 1cdcA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 24.0 | 2.62e-01 | 77.0% | 46.9% |
| 1ie0A00 | 3.30.1360.80 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) | 0.53 | 41.0 | 3.86e-01 | 91.0% | 65.4% |
| 4wqoD00 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.53 | 37.0 | 3.58e-01 | 73.0% | 82.3% |
| 6pwkA02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.53 | 32.0 | 2.61e-01 | 97.5% | 31.2% |
| 3nftA00 | 1.20.1710.10 | Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like | 0.52 | 39.0 | 3.02e-01 | 77.0% | 36.6% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.52 | 41.0 | 3.82e-01 | 86.9% | 66.7% |
| 6d5xA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.51 | 39.0 | 3.63e-01 | 80.3% | 81.5% |
| 2g2dA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.51 | 40.0 | 3.63e-01 | 82.0% | 82.5% |
| 1jogA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.51 | 40.0 | 3.86e-01 | 95.1% | 74.1% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4076554 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.86 | 75.0 | 6.55e-01 | 95.1% | 64.7% |
| 4070520 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.86 | 72.0 | 5.87e-01 | 91.8% | 51.7% |
| 4952830 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.84 | 78.0 | 6.64e-01 | 96.7% | 75.0% |
| 5051427 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.84 | 75.0 | 5.91e-01 | 98.4% | 50.0% |
| 4977082 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.83 | 74.0 | 5.80e-01 | 93.4% | 50.0% |
| 4984140 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.82 | 73.0 | 5.84e-01 | 93.4% | 51.4% |
| 4376234 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.82 | 75.0 | 5.83e-01 | 100.0% | 48.2% |
| 5033537 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.81 | 75.0 | 6.16e-01 | 95.9% | 64.5% |
| 4965561 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.81 | 74.0 | 6.14e-01 | 95.9% | 64.0% |
| 5025670 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.80 | 74.0 | 6.37e-01 | 96.7% | 70.0% |
| 5059032 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.80 | 73.0 | 6.12e-01 | 95.9% | 67.2% |
| 5046003 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.80 | 73.0 | 6.13e-01 | 95.1% | 65.8% |
| 5059164 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.80 | 72.0 | 5.58e-01 | 95.9% | 60.1% |
| 3427778 | 604.1.1.144 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF26575 | 0.79 | 49.0 | 5.93e-01 | 86.1% | 93.8% |
| 5071234 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.79 | 71.0 | 5.90e-01 | 94.3% | 66.0% |
| 5067427 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.79 | 73.0 | 6.08e-01 | 96.7% | 65.6% |
| 3988949 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.78 | 73.0 | 6.33e-01 | 100.0% | 73.3% |
| 4994291 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.77 | 70.0 | 5.70e-01 | 96.7% | 61.9% |
| 5075710 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.75 | 63.0 | 5.84e-01 | 90.2% | 72.0% |
| 4170819 | 4070.1.1.3 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › DUF3267 | 0.74 | 61.0 | 5.20e-01 | 96.7% | 55.8% |
| 5058480 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.71 | 61.0 | 5.57e-01 | 90.2% | 83.2% |
| 3330299 | 4070.1.1.4 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50B | 0.67 | 56.0 | 4.52e-01 | 90.2% | 78.6% |
| 4541208 | 3758.2.1.1 ↗ | alpha bundles › Bacterial hemolysins-like › Biopolymer transport protein ExbB › Biopolymer transport protein ExbB › MotA_ExbB | 0.65 | 55.0 | 4.30e-01 | 90.2% | 67.5% |
| 3285767 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.65 | 50.0 | 5.26e-01 | 96.7% | 91.7% |
| 4109540 | 3758.2.1.1 ↗ | alpha bundles › Bacterial hemolysins-like › Biopolymer transport protein ExbB › Biopolymer transport protein ExbB › MotA_ExbB | 0.64 | 54.0 | 4.31e-01 | 90.2% | 71.7% |
| 3587356 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.64 | 34.0 | 3.85e-01 | 81.1% | 68.9% |
| 3284904 | 4070.1.1.4 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50B | 0.63 | 55.0 | 4.50e-01 | 94.3% | 88.6% |
| 3590219 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.63 | 33.0 | 3.83e-01 | 81.1% | 68.9% |
| 2994064 | 3758.2.1.1 ↗ | alpha bundles › Bacterial hemolysins-like › Biopolymer transport protein ExbB › Biopolymer transport protein ExbB › MotA_ExbB | 0.62 | 52.0 | 4.10e-01 | 90.2% | 68.8% |
| 3695962 | 109.4.1.368 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SHNi-TPR | 0.61 | 44.0 | 3.04e-01 | 74.6% | 32.6% |
| 4140531 | 5051.1.1.10 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 | 0.61 | 50.0 | 3.33e-01 | 87.7% | 78.4% |
| 1168094 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.61 | 39.0 | 4.37e-01 | 84.4% | 86.5% |
| 1182828 | 309.1.1.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase | 0.60 | 51.0 | 4.27e-01 | 92.6% | 85.2% |
| 1146572 | 304.152.1.1 ↗ | a+b two layers › Alpha-beta plaits › E4-ORF3 › E4-ORF3 › Adeno_E4_ORF3 | 0.60 | 45.0 | 4.65e-01 | 87.7% | 82.8% |
| 3772989 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.60 | 40.0 | 3.34e-01 | 99.2% | 37.3% |
| 3871141 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.60 | 40.0 | 3.41e-01 | 99.2% | 40.0% |
| 3864443 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.59 | 40.0 | 3.35e-01 | 99.2% | 38.2% |
| 3931635 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.59 | 33.0 | 4.00e-01 | 82.0% | 86.7% |
| 3508268 | 206.1.1.44 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF1679 | 0.59 | 41.0 | 3.14e-01 | 86.1% | 29.8% |
| 4068249 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.58 | 35.0 | 4.10e-01 | 82.0% | 88.7% |
| 5075111 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.58 | 45.0 | 4.25e-01 | 81.1% | 89.6% |
| 5042923 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.58 | 41.0 | 4.18e-01 | 72.1% | 100.0% |
| 3832382 | 5069.1.3.60 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › OST3_OST6 | 0.58 | 42.0 | 4.30e-01 | 76.2% | 80.0% |
| 3391939 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.57 | 42.0 | 4.32e-01 | 76.2% | 82.6% |
| 3287687 | 633.23.1.7 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › DUF5336 | 0.56 | 40.0 | 4.03e-01 | 100.0% | 72.0% |
| 3233208 | 5067.1.1.3 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched | 0.56 | 51.0 | 3.06e-01 | 100.0% | 44.0% |
| 4304409 | 109.4.1.1151 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HIR3_helical | 0.56 | 46.0 | 3.45e-01 | 86.9% | 59.7% |
| 4519020 | 3281.1.1.1 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M | 0.56 | 49.0 | 3.31e-01 | 100.0% | 34.3% |
| 4567496 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.55 | 32.0 | 3.80e-01 | 78.7% | 90.7% |
| 3172621 | 309.1.1.8 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M | 0.54 | 44.0 | 3.56e-01 | 91.0% | 68.2% |
| 3492369 | 622.4.1.21 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › Frag1 | 0.54 | 42.0 | 4.24e-01 | 82.0% | 87.5% |
| 3270655 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.54 | 46.0 | 3.58e-01 | 92.6% | 67.9% |
| 4257164 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.54 | 32.0 | 3.73e-01 | 81.1% | 87.5% |
| 3436346 | 604.5.1.32 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › TMEM120A-B | 0.53 | 44.0 | 3.49e-01 | 89.3% | 62.0% |
| 3716197 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.53 | 34.0 | 3.69e-01 | 81.1% | 77.0% |
| 3948506 | 150.2.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Cobalamin adenosyltransferase › Cobalamin adenosyltransferase › Cob_adeno_trans | 0.53 | 37.0 | 3.19e-01 | 71.3% | 70.3% |
| 3813013 | 604.1.1.110 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › WIT1_2_N | 0.53 | 43.0 | 3.90e-01 | 85.2% | 76.9% |
| 3234667 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.52 | 44.0 | 3.18e-01 | 90.2% | 70.4% |
| 3592688 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.52 | 44.0 | 3.84e-01 | 92.6% | 87.6% |
| 3636696 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.51 | 45.0 | 3.11e-01 | 95.9% | 49.9% |
| 3665152 | 9001.1.1.3 ↗ | alpha bundles › TMEM120/ELO/TLC › TMEM120/ELO/TLC › TMEM120/ELO/TLC › TMPIT | 0.51 | 43.0 | 3.38e-01 | 89.3% | 52.5% |
| 3802552 | 601.1.1.91 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DUF1218 | 0.51 | 33.0 | 3.00e-01 | 83.6% | 48.5% |
| 3652035 | 601.16.1.8 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › DUF1218 | 0.50 | 37.0 | 3.30e-01 | 80.3% | 53.7% |
| 3221030 | 5001.1.1.66 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg | 0.50 | 43.0 | 3.30e-01 | 95.1% | 68.7% |
D2
high
residues 135-184
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z72A00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.70 | 58.0 | 3.91e-01 | 100.0% | 36.1% |
| 2ewfA02 | 1.20.1270.310 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.66 | 46.0 | 3.97e-01 | 74.0% | 61.7% |
| 4hfkB00 | 1.20.120.1620 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.64 | 53.0 | 4.42e-01 | 100.0% | 85.7% |
| 2ac4A02 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 43.0 | 3.12e-01 | 70.0% | 61.3% |
| 8d7hD01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.62 | 52.0 | 3.65e-01 | 98.0% | 49.1% |
| 4gtnA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.59 | 47.0 | 4.32e-01 | 98.0% | 81.1% |
| 3qwuA03 | 3.30.70.2160 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 45.0 | 3.47e-01 | 94.0% | 40.3% |
| 2qs7A00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.58 | 49.0 | 3.61e-01 | 96.0% | 94.2% |
| 2vugA04 | 1.20.58.2250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 44.0 | 3.84e-01 | 92.0% | 63.3% |
| 3czpB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 47.0 | 3.16e-01 | 96.0% | 72.8% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 46.0 | 4.56e-01 | 100.0% | 100.0% |
| 1h6qA00 | 2.170.150.10 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A | 0.53 | 44.0 | 3.18e-01 | 100.0% | 69.0% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 44.0 | 3.80e-01 | 96.0% | 63.4% |
| 2r0rB00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.52 | 41.0 | 3.70e-01 | 96.0% | 85.9% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.51 | 33.0 | 3.40e-01 | 70.0% | 68.8% |
| 7wivA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 40.0 | 2.59e-01 | 100.0% | 43.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4272154 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.71 | 50.0 | 4.04e-01 | 74.0% | 58.9% |
| 5050630 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 47.0 | 4.01e-01 | 72.0% | 48.2% |
| 3738358 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.69 | 55.0 | 4.79e-01 | 86.0% | 78.7% |
| 3588719 | 564.1.1.0 ↗ | alpha arrays › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors | 0.69 | 55.0 | 5.17e-01 | 94.0% | 83.1% |
| 1712010 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 52.0 | 5.15e-01 | 88.0% | 86.8% |
| 3586770 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 56.0 | 5.50e-01 | 100.0% | 90.9% |
| 3594498 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.64 | 47.0 | 4.18e-01 | 76.0% | 65.7% |
| 3584182 | 604.9.1.18 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Zip | 0.61 | 50.0 | 4.27e-01 | 92.0% | 83.5% |
| 5011657 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.59 | 47.0 | 3.35e-01 | 96.0% | 60.0% |
| 2056101 | 4973.1.1.1 ↗ | alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaB_bind | 0.54 | 42.0 | 4.01e-01 | 92.0% | 89.2% |
| 3708001 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.54 | 45.0 | 4.05e-01 | 94.0% | 71.4% |