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qh_7_scaffold_1_prodigal-single.1__X__X__00430
Bact-Virqh_7_scaffold_1_prodigal-single.1__X__X__00430
Identity
- Kingdom:
- phage
Quality
79.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-74
Domain cluster:
rep: SR-VP_4-6_scaffold_141_4176636_prodigal-single.1__X__X__00125__D2-85
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.75 | 66.0 | 6.12e-01 | 97.3% | 85.9% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 43.0 | 4.33e-01 | 93.2% | 84.2% |
| 1mg7A01 | 3.30.70.1000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Switch protein XOL-1, GHMP-like | 0.52 | 45.0 | 3.48e-01 | 100.0% | 81.1% |
| 1l7qA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 43.0 | 3.08e-01 | 100.0% | 33.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963488 | 821.1.1.7 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › LEM-3_GIY-YIG | 0.79 | 73.0 | 6.21e-01 | 100.0% | 73.0% |
| 77927 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.75 | 66.0 | 6.06e-01 | 97.3% | 84.0% |
| 5070582 | 815.1.1.0 ↗ | a+b two layers › Chromosomal protein MC1 › Chromosomal protein MC1 › Chromosomal protein MC1 | 0.73 | 43.0 | 4.10e-01 | 80.8% | 50.6% |
| 4344289 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.70 | 62.0 | 5.09e-01 | 97.3% | 63.8% |
| 2512670 | 244.1.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE | 0.57 | 43.0 | 4.02e-01 | 83.6% | 93.6% |
| 3964228 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.55 | 42.0 | 3.85e-01 | 83.6% | 100.0% |
| 4971848 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.51 | 43.0 | 2.95e-01 | 100.0% | 37.9% |
D2
high
residues 300-407
Domain cluster:
rep: IMGVR_UViG_3300000151_000032-3300000151-SI53jan11_200mDRAFT_10009437__D1-99