←Back to structures
qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00004
Bact-Virqs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00004
Identity
- Kingdom:
- phage
Quality
73.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-68
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.73 | 51.0 | 3.81e-01 | 74.2% | 47.7% |
| 2de6A02 | 2.20.25.680 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.67 | 42.0 | 4.40e-01 | 88.7% | 69.0% |
| 3nvoA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.66 | 39.0 | 3.06e-01 | 83.9% | 28.2% |
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.64 | 55.0 | 4.60e-01 | 100.0% | 72.8% |
| 3u1wA01 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 47.0 | 3.35e-01 | 90.3% | 27.3% |
| 2qq6A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.62 | 53.0 | 4.32e-01 | 95.2% | 95.7% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.62 | 54.0 | 4.16e-01 | 100.0% | 85.6% |
| 3lm3A02 | 3.30.1120.110 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.61 | 49.0 | 4.12e-01 | 88.7% | 85.0% |
| 3ge2A00 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 53.0 | 4.68e-01 | 96.8% | 86.5% |
| 1v58A01 | 3.10.450.70 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Disulphide bond isomerase, DsbC/G, N-terminal | 0.60 | 49.0 | 4.76e-01 | 91.9% | 80.3% |
| 3sluA02 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 50.0 | 3.96e-01 | 98.4% | 63.5% |
| 4csdB00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.59 | 53.0 | 3.44e-01 | 100.0% | 39.3% |
| 3gceA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.59 | 45.0 | 3.93e-01 | 88.7% | 86.5% |
| 6sulA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 43.0 | 3.59e-01 | 79.0% | 79.6% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.58 | 45.0 | 2.81e-01 | 95.2% | 15.4% |
| 3sreA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.58 | 50.0 | 3.20e-01 | 100.0% | 36.2% |
| 3tdgA01 | 3.10.450.520 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 40.0 | 3.96e-01 | 74.2% | 74.2% |
| 7ne4A01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.57 | 50.0 | 3.17e-01 | 100.0% | 43.2% |
| 8hpoK01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 48.0 | 3.00e-01 | 100.0% | 26.6% |
| 1e2tA03 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.56 | 47.0 | 3.91e-01 | 98.4% | 80.3% |
| 1fuwA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 41.0 | 3.70e-01 | 80.6% | 62.6% |
| 2qpzA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.56 | 44.0 | 3.83e-01 | 88.7% | 82.5% |
| 1k3sA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 44.0 | 3.66e-01 | 87.1% | 75.9% |
| 4u6bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 48.0 | 3.01e-01 | 100.0% | 26.2% |
| 7vt9A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 44.0 | 4.16e-01 | 88.7% | 83.6% |
| 2rqxA00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 44.0 | 4.08e-01 | 93.5% | 96.3% |
| 4gyiA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 40.0 | 3.57e-01 | 93.5% | 99.0% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3295272 | 387.1.3.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Colipase-like | 0.73 | 47.0 | 5.36e-01 | 79.0% | 91.1% |
| 4028683 | 3504.3.1.0 ↗ | beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain | 0.70 | 51.0 | 3.69e-01 | 96.8% | 27.2% |
| 5014685 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.66 | 41.0 | 4.11e-01 | 79.0% | 60.0% |
| 3608706 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.66 | 61.0 | 3.71e-01 | 100.0% | 33.9% |
| 1171964 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.64 | 40.0 | 4.16e-01 | 85.5% | 67.2% |
| 4809733 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.64 | 46.0 | 3.43e-01 | 95.2% | 28.7% |
| 4423084 | 3504.3.1.1 ↗ | beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N | 0.63 | 47.0 | 3.44e-01 | 95.2% | 28.8% |
| 3827726 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.63 | 57.0 | 3.62e-01 | 100.0% | 39.7% |
| 3801954 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.61 | 54.0 | 3.39e-01 | 100.0% | 28.0% |
| 3460207 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.60 | 52.0 | 3.46e-01 | 100.0% | 44.4% |
| 3599747 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.60 | 53.0 | 3.36e-01 | 100.0% | 34.9% |
| 3836621 | 66.1.1.2 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske_2 | 0.60 | 48.0 | 3.77e-01 | 90.3% | 72.1% |
| 3829527 | 220.1.1.153 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TRF2_HOY1 | 0.59 | 49.0 | 3.79e-01 | 98.4% | 84.5% |
| 3972580 | 331.1.1.3 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › AlkA_N | 0.59 | 42.0 | 3.93e-01 | 98.4% | 60.0% |
| 5011912 | 4294.1.1.1 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske | 0.58 | 46.0 | 4.05e-01 | 88.7% | 92.6% |
| 3167601 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.58 | 49.0 | 4.27e-01 | 95.2% | 74.7% |
| 4033134 | 3264.1.1.0 ↗ | 0.57 | 42.0 | 3.16e-01 | 79.0% | 34.0% | |
| 3613890 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 50.0 | 3.06e-01 | 100.0% | 32.0% |
| 1400361 | 5.1.3.34 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF5128 | 0.56 | 48.0 | 3.04e-01 | 98.4% | 18.4% |
| 3784810 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.56 | 43.0 | 3.80e-01 | 85.5% | 87.4% |
| 3953302 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.56 | 46.0 | 3.91e-01 | 91.9% | 58.7% |
| 3805925 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.56 | 48.0 | 3.09e-01 | 100.0% | 40.6% |
| 3706026 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.56 | 47.0 | 3.35e-01 | 98.4% | 60.5% |
| 4988423 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.55 | 47.0 | 4.38e-01 | 96.8% | 82.5% |
| 3592221 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 47.0 | 3.85e-01 | 98.4% | 78.0% |
| 3995797 | 220.1.1.160 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD | 0.54 | 43.0 | 4.30e-01 | 100.0% | 84.6% |
| 4003103 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.54 | 47.0 | 3.66e-01 | 100.0% | 86.2% |
| 5039195 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.54 | 46.0 | 3.23e-01 | 100.0% | 67.9% |
| 5013176 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.53 | 45.0 | 4.28e-01 | 95.2% | 93.3% |
| 3785319 | 9.14.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 | 0.53 | 43.0 | 4.01e-01 | 96.8% | 95.3% |
| 5012108 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 44.0 | 2.90e-01 | 98.4% | 31.8% |
| 3404874 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.53 | 45.0 | 3.15e-01 | 98.4% | 67.1% |
| 3232904 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.52 | 45.0 | 3.11e-01 | 100.0% | 72.4% |
| 3597933 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.52 | 44.0 | 3.21e-01 | 98.4% | 74.5% |
| 3436491 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.52 | 43.0 | 3.29e-01 | 96.8% | 40.0% |