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qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00191
Bact-Virqs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00191
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-184
Domain cluster:
rep: MN703407.1__QGZ16799.1__PBI_LEAF_155__00152__D21-225
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04488.22 best | Gly_transf_sug | 33.2 | 9.60e-08 | 54.9% | 94.6% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ll0B00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.69 | 64.0 | 5.62e-01 | 100.0% | 68.2% |
| 2i5eA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.66 | 56.0 | 5.83e-01 | 100.0% | 96.4% |
| 7uqyB01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.66 | 61.0 | 5.79e-01 | 100.0% | 90.2% |
| 2wvlB00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.64 | 60.0 | 4.64e-01 | 100.0% | 63.4% |
| 3zf8A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.64 | 59.0 | 5.06e-01 | 100.0% | 88.9% |
| 2amlB01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.60 | 35.0 | 3.40e-01 | 81.9% | 48.4% |
| 2dpwA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.60 | 56.0 | 5.13e-01 | 100.0% | 92.6% |
| 2px7A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.59 | 53.0 | 5.18e-01 | 100.0% | 88.7% |
| 2z04A01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 30.0 | 4.16e-01 | 85.2% | 98.9% |
| 1dk7A00 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.57 | 34.0 | 3.72e-01 | 71.4% | 71.2% |
| 3glvA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 35.0 | 4.21e-01 | 99.5% | 93.4% |
| 3elbA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 35.0 | 4.01e-01 | 99.5% | 83.2% |
| 3l8uA00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.55 | 35.0 | 3.74e-01 | 100.0% | 74.0% |
| 3rp7A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 35.0 | 3.64e-01 | 95.1% | 69.6% |
| 1r6xA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 39.0 | 3.68e-01 | 97.3% | 62.9% |
| 1mxiA00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.53 | 35.0 | 3.81e-01 | 100.0% | 77.6% |
| 3p9pA03 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.53 | 39.0 | 4.24e-01 | 77.5% | 98.7% |
| 3wnvA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 38.0 | 3.80e-01 | 100.0% | 73.0% |
| 7fg9A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 38.0 | 4.07e-01 | 75.8% | 91.4% |
| 2h29A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 39.0 | 3.89e-01 | 100.0% | 76.1% |
| 2d4aD01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 38.0 | 4.20e-01 | 100.0% | 100.0% |
| 1ff9A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 41.0 | 4.22e-01 | 100.0% | 91.1% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3387081 | 7516.1.1.67 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug | 0.87 | 84.0 | 7.29e-01 | 100.0% | 74.1% |
| 3366906 | 7516.1.1.110 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug, Gb3_synth | 0.83 | 79.0 | 6.26e-01 | 100.0% | 60.6% |
| 3296832 | 7516.1.1.165 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug, Gb3_synth, Caps_synth | 0.82 | 78.0 | 6.42e-01 | 100.0% | 65.9% |
| 3463791 | 7516.1.1.110 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug, Gb3_synth | 0.81 | 78.0 | 6.40e-01 | 100.0% | 67.0% |
| 4626081 | 7516.1.1.67 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug | 0.81 | 74.0 | 6.85e-01 | 94.5% | 94.1% |
| 4078285 | 7516.1.1.75 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Caps_synth | 0.80 | 76.0 | 5.85e-01 | 100.0% | 62.7% |
| 4547228 | 7516.1.1.75 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Caps_synth | 0.79 | 75.0 | 5.88e-01 | 100.0% | 61.1% |
| 3196742 | 7516.1.1.67 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug | 0.78 | 73.0 | 6.05e-01 | 100.0% | 60.7% |
| None | — | 0.78 | 63.0 | 6.40e-01 | 83.5% | 90.6% | |
| 3697890 | 7516.1.1.67 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug | 0.78 | 74.0 | 5.85e-01 | 100.0% | 66.2% |
| 3587491 | 7516.1.1.75 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Caps_synth | 0.75 | 71.0 | 6.04e-01 | 100.0% | 65.4% |
| 3976650 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.72 | 64.0 | 5.75e-01 | 100.0% | 70.8% |
| 3470238 | 7516.1.1.6 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 | 0.70 | 65.0 | 5.56e-01 | 100.0% | 63.9% |
| 3580109 | 7516.1.1.6 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 | 0.69 | 60.0 | 6.16e-01 | 93.4% | 97.1% |
| 3744329 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.68 | 55.0 | 5.56e-01 | 83.0% | 84.4% |
| 3831036 | 7516.1.1.105 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Fringe, DUF604 | 0.67 | 61.0 | 5.39e-01 | 100.0% | 72.5% |
| 3617038 | 7516.1.1.33 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 | 0.66 | 62.0 | 4.92e-01 | 100.0% | 61.1% |
| 3953008 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.66 | 61.0 | 5.50e-01 | 100.0% | 76.7% |
| 5008162 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.65 | 60.0 | 5.22e-01 | 100.0% | 74.2% |
| 3986352 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.65 | 60.0 | 5.06e-01 | 100.0% | 68.3% |
| 4988626 | 7516.1.1.10 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CofC | 0.65 | 57.0 | 5.41e-01 | 100.0% | 80.8% |
| 4103126 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.64 | 54.0 | 5.40e-01 | 100.0% | 87.0% |
| 4926932 | 7516.1.1.22 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Osmo_MPGsynth | 0.64 | 59.0 | 4.57e-01 | 100.0% | 64.1% |
| 3605664 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.64 | 60.0 | 4.81e-01 | 100.0% | 71.0% |
| 3712326 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.63 | 59.0 | 4.63e-01 | 100.0% | 68.5% |
| 5030046 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.62 | 51.0 | 5.34e-01 | 100.0% | 94.5% |
| 5030836 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.61 | 53.0 | 5.17e-01 | 100.0% | 84.0% |
| 3278176 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.60 | 32.0 | 4.21e-01 | 99.5% | 95.8% |
| 5003382 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.59 | 55.0 | 5.38e-01 | 100.0% | 95.4% |
| 3386962 | 2003.1.1.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH | 0.58 | 37.0 | 3.89e-01 | 100.0% | 69.1% |
| 3214927 | 7516.1.1.69 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_92 | 0.58 | 51.0 | 4.53e-01 | 100.0% | 67.1% |
| 3189147 | 7516.1.1.108 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_17 | 0.57 | 52.0 | 4.20e-01 | 100.0% | 59.5% |
| 3955005 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.57 | 51.0 | 4.66e-01 | 100.0% | 73.1% |
| 4364109 | 2003.1.10.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › RS_preATP-grasp-like | 0.56 | 31.0 | 3.88e-01 | 87.4% | 90.5% |
| 4967531 | 2003.1.5.41 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RMNT_CmcI | 0.55 | 41.0 | 3.74e-01 | 100.0% | 57.4% |
| 3967323 | 2003.1.1.180 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DUF188 | 0.54 | 37.0 | 3.89e-01 | 84.6% | 78.1% |
| 4471935 | 2006.1.4.17 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF188 | 0.53 | 36.0 | 3.93e-01 | 84.6% | 83.3% |
| 3959725 | 2003.1.14.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase | 0.52 | 37.0 | 3.97e-01 | 100.0% | 82.5% |
| 3794179 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.52 | 37.0 | 3.76e-01 | 98.4% | 73.7% |
| 4094546 | 2006.1.1.55 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › DUF188 | 0.52 | 39.0 | 4.22e-01 | 98.4% | 94.0% |
| 3838965 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.52 | 37.0 | 4.07e-01 | 79.7% | 90.0% |
| 4451990 | 7512.1.1.82 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › DUF188 | 0.51 | 38.0 | 4.23e-01 | 98.4% | 97.2% |
| 4513258 | 2006.1.4.17 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF188 | 0.51 | 39.0 | 4.20e-01 | 97.3% | 94.2% |
| 3694875 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.50 | 47.0 | 3.86e-01 | 100.0% | 70.8% |
| 4521349 | 7512.1.1.82 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › DUF188 | 0.50 | 39.0 | 4.21e-01 | 98.4% | 97.3% |
| 4066171 | 2003.1.1.148 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short, KR | 0.50 | 47.0 | 4.10e-01 | 100.0% | 98.1% |
| 3289723 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.50 | 38.0 | 4.10e-01 | 79.1% | 92.3% |
| 5067597 | 2008.4.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like | 0.50 | 31.0 | 3.88e-01 | 84.6% | 100.0% |
D2
high
residues 191-245
Domain cluster:
representative