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qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00196
Bact-Virqs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00196
Identity
- Kingdom:
- phage
Quality
85.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-54
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5tuuA00 | 1.20.140.80 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Transcription factor DP | 0.86 | 78.0 | 5.52e-01 | 96.3% | 37.5% |
| 2o36A02 | 1.10.1370.10 | Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › Neurolysin, domain 3 | 0.74 | 58.0 | 3.42e-01 | 83.3% | 25.1% |
D2
medium
residues 55-106
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.76 | 43.0 | 3.87e-01 | 78.8% | 42.3% |
| 1y1uA01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.75 | 53.0 | 3.54e-01 | 75.0% | 87.7% |
| 1rm6B02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.73 | 47.0 | 3.65e-01 | 98.1% | 31.8% |
| 2az0B00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.72 | 47.0 | 4.18e-01 | 88.5% | 49.3% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.69 | 51.0 | 3.94e-01 | 92.3% | 36.6% |
| 3f1iS00 | 1.20.5.1940 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 51.0 | 4.47e-01 | 80.8% | 79.2% |
| 2ktmA00 | 1.10.790.10 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain | 0.67 | 54.0 | 5.11e-01 | 96.2% | 73.5% |
| 1omsA00 | 3.30.70.1050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain | 0.67 | 55.0 | 4.42e-01 | 96.2% | 57.9% |
| 4ye6A02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 45.0 | 4.43e-01 | 75.0% | 69.0% |
| 6xasW01 | 3.90.940.10 | Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › RNA polymerase subunit, RPB6/omega | 0.65 | 39.0 | 4.04e-01 | 90.4% | 63.3% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.63 | 52.0 | 3.78e-01 | 90.4% | 34.6% |
| 1fs0G02 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.62 | 53.0 | 4.37e-01 | 92.3% | 53.9% |
| 2xokP00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.62 | 44.0 | 3.98e-01 | 84.6% | 54.1% |
| 3cwzB01 | 1.20.58.900 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain | 0.61 | 45.0 | 3.32e-01 | 80.8% | 61.6% |
| 4fppB01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.61 | 48.0 | 4.29e-01 | 88.5% | 62.0% |
| 3u3iA02 | 1.20.58.1110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 50.0 | 3.93e-01 | 90.4% | 55.6% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 47.0 | 4.45e-01 | 90.4% | 69.8% |
| 4hwdD00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.60 | 49.0 | 3.99e-01 | 86.5% | 93.3% |
| 7ztbB01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.59 | 46.0 | 3.25e-01 | 86.5% | 66.3% |
| 1u5eA01 | 6.10.250.220 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.58 | 40.0 | 3.98e-01 | 100.0% | 69.8% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 48.0 | 3.76e-01 | 90.4% | 52.0% |
| 2kg7B00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.52 | 46.0 | 3.73e-01 | 98.1% | 52.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 407167 | 3824.1.1.1 ↗ | alpha bundles › HIV Rev › HIV Rev › HIV Rev › REV | 0.81 | 50.0 | 4.68e-01 | 90.4% | 53.2% |
| 4934139 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.79 | 49.0 | 4.71e-01 | 100.0% | 55.0% |
| 3279122 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.71 | 57.0 | 4.57e-01 | 92.3% | 46.4% |
| 3441543 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.63 | 52.0 | 4.10e-01 | 92.3% | 89.1% |
| 3947237 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.63 | 55.0 | 3.73e-01 | 100.0% | 84.6% |