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qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00211
Bact-Virqs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00211
Identity
- Kingdom:
- phage
Quality
72.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 41-85
D2
high
residues 109-162
Domain cluster:
representative
CATH (86)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4pwuC00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.90 | 84.0 | 7.30e-01 | 100.0% | 78.2% |
| 3tviA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.83 | 75.0 | 5.26e-01 | 100.0% | 39.0% |
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.82 | 75.0 | 6.39e-01 | 100.0% | 80.7% |
| 2cdqA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.82 | 72.0 | 6.25e-01 | 100.0% | 72.6% |
| 3aawA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.81 | 71.0 | 5.02e-01 | 100.0% | 36.4% |
| 2re1A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.80 | 71.0 | 6.41e-01 | 100.0% | 79.7% |
| 2f06A00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.80 | 72.0 | 5.19e-01 | 100.0% | 41.0% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.78 | 68.0 | 6.28e-01 | 100.0% | 80.0% |
| 4mz0B05 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.77 | 67.0 | 6.28e-01 | 100.0% | 79.1% |
| 4qbuA03 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.77 | 67.0 | 6.32e-01 | 100.0% | 84.8% |
| 3dfeA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.76 | 66.0 | 5.82e-01 | 100.0% | 70.7% |
| 3gr5A02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.75 | 65.0 | 6.09e-01 | 100.0% | 86.8% |
| 3c1mA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.75 | 64.0 | 4.63e-01 | 100.0% | 37.2% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.75 | 66.0 | 6.03e-01 | 100.0% | 77.5% |
| 3im8A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.74 | 65.0 | 5.92e-01 | 100.0% | 76.7% |
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.74 | 54.0 | 4.23e-01 | 77.8% | 65.8% |
| 2cpdA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.73 | 64.0 | 5.80e-01 | 100.0% | 78.7% |
| 4i68A00 | 3.30.70.1800 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 59.0 | 5.09e-01 | 100.0% | 55.6% |
| 2mkyA00 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.73 | 63.0 | 6.18e-01 | 100.0% | 98.3% |
| 4clfA02 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.73 | 63.0 | 4.40e-01 | 100.0% | 42.9% |
| 7ahbB01 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.73 | 61.0 | 5.99e-01 | 100.0% | 88.1% |
| 2cqhA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.73 | 62.0 | 5.27e-01 | 100.0% | 64.5% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.72 | 61.0 | 5.51e-01 | 100.0% | 82.3% |
| 1b4bA00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.72 | 63.0 | 5.81e-01 | 100.0% | 80.3% |
| 3cjsA00 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.72 | 56.0 | 5.55e-01 | 96.3% | 81.0% |
| 7qddB01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.72 | 62.0 | 5.66e-01 | 100.0% | 78.1% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.72 | 60.0 | 5.20e-01 | 100.0% | 71.1% |
| 1r89A03 | 3.30.70.590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain | 0.71 | 62.0 | 4.69e-01 | 100.0% | 53.7% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 60.0 | 5.70e-01 | 100.0% | 81.8% |
| 4oloB00 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.71 | 61.0 | 5.33e-01 | 100.0% | 65.5% |
| 1konA03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.71 | 59.0 | 5.40e-01 | 100.0% | 70.7% |
| 1s7hA02 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 61.0 | 5.39e-01 | 100.0% | 70.7% |
| 4lowA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.70 | 59.0 | 5.25e-01 | 100.0% | 76.2% |
| 2m88A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.70 | 60.0 | 5.26e-01 | 100.0% | 73.3% |
| 2kyzA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 60.0 | 5.66e-01 | 100.0% | 82.1% |
| 1x4dA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.70 | 60.0 | 4.95e-01 | 100.0% | 60.8% |
| 1sc6A03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 60.0 | 5.33e-01 | 100.0% | 76.8% |
| 1uu1B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.70 | 58.0 | 4.47e-01 | 100.0% | 39.7% |
| 1vi7A02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 60.0 | 5.55e-01 | 100.0% | 76.1% |
| 2dgtA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.69 | 60.0 | 5.50e-01 | 100.0% | 78.1% |
| 1ufwA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.69 | 57.0 | 4.88e-01 | 100.0% | 69.5% |
| 1gmuA01 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.69 | 54.0 | 5.07e-01 | 100.0% | 71.6% |
| 2j0wA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.69 | 58.0 | 5.32e-01 | 100.0% | 88.0% |
| 1vw4700 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.69 | 58.0 | 4.77e-01 | 100.0% | 51.9% |
| 3mahA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.69 | 57.0 | 5.38e-01 | 100.0% | 88.4% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.69 | 58.0 | 5.47e-01 | 100.0% | 85.3% |
| 6e4nA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.68 | 59.0 | 5.44e-01 | 100.0% | 81.7% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 58.0 | 5.35e-01 | 100.0% | 79.2% |
| 2pffB05 | 3.30.70.2430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 57.0 | 5.60e-01 | 100.0% | 95.1% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.68 | 57.0 | 4.22e-01 | 100.0% | 36.9% |
| 2iboA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 58.0 | 5.01e-01 | 100.0% | 66.3% |
| 4erdA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.68 | 58.0 | 4.72e-01 | 100.0% | 58.3% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.68 | 57.0 | 5.20e-01 | 100.0% | 80.5% |
| 4pfyA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.67 | 56.0 | 4.22e-01 | 100.0% | 51.7% |
| 2yweA04 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 59.0 | 4.65e-01 | 100.0% | 50.0% |
| 1s7hA01 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 57.0 | 5.10e-01 | 100.0% | 71.2% |
| 3k85A00 | 3.30.230.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.67 | 59.0 | 3.65e-01 | 100.0% | 29.4% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 57.0 | 4.99e-01 | 100.0% | 67.1% |
| 2dgrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.67 | 55.0 | 5.24e-01 | 100.0% | 94.0% |
| 7uvpA02 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.66 | 55.0 | 5.21e-01 | 100.0% | 88.4% |
| 1lxnA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 55.0 | 4.66e-01 | 100.0% | 63.3% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 55.0 | 4.57e-01 | 100.0% | 59.2% |
| 3kdgA02 | 3.30.1370.100 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain | 0.65 | 55.0 | 4.68e-01 | 100.0% | 63.8% |
| 1ohvA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.64 | 55.0 | 4.00e-01 | 100.0% | 51.2% |
| 2y3mA02 | 3.30.1370.130 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.64 | 48.0 | 4.83e-01 | 90.7% | 82.1% |
| 3getA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.64 | 53.0 | 4.59e-01 | 100.0% | 59.6% |
| 1vx4407 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 52.0 | 4.93e-01 | 100.0% | 87.0% |
| 2dy1A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.63 | 53.0 | 4.84e-01 | 100.0% | 80.3% |
| 3gv5B01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.63 | 52.0 | 4.07e-01 | 100.0% | 75.0% |
| 2h5eA03 | 3.30.70.3280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptide chain release factor 3, domain III | 0.63 | 53.0 | 4.06e-01 | 100.0% | 41.6% |
| 2gqcA01 | 3.30.70.2080 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 49.0 | 4.94e-01 | 92.6% | 94.6% |
| 1eayD00 | 3.30.70.400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CheY-binding domain of CheA | 0.63 | 51.0 | 4.86e-01 | 100.0% | 81.2% |
| 3v8hC00 | 3.30.572.10 | Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain | 0.63 | 45.0 | 2.83e-01 | 77.8% | 14.9% |
| 1kn6A00 | 3.30.70.850 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8, pro-domain | 0.61 | 50.0 | 4.67e-01 | 100.0% | 82.2% |
| 3gdzB00 | 3.30.1360.70 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Arginyl tRNA synthetase N-terminal domain | 0.61 | 46.0 | 3.88e-01 | 88.9% | 58.9% |
| 2hiyA01 | 3.30.70.1280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SP0830-like domains | 0.61 | 50.0 | 4.44e-01 | 100.0% | 70.5% |
| 2hiyA02 | 3.30.70.1260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › bacterial protein sp0830 like | 0.58 | 47.0 | 4.16e-01 | 100.0% | 64.1% |
| 2kdoA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 47.0 | 4.29e-01 | 98.1% | 72.5% |
| 3e54A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.57 | 45.0 | 3.33e-01 | 90.7% | 34.0% |
| 3ssmC02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 39.0 | 2.69e-01 | 74.1% | 30.3% |
| 1go4A00 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.56 | 44.0 | 3.08e-01 | 90.7% | 53.1% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.56 | 39.0 | 3.62e-01 | 81.5% | 56.0% |
| 1nj8A03 | 3.30.110.30 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › C-terminal domain of ProRS | 0.53 | 36.0 | 3.57e-01 | 74.1% | 67.2% |
| 1yyvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 37.0 | 3.02e-01 | 75.9% | 43.8% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 36.0 | 2.91e-01 | 74.1% | 44.2% |
| 3zcoA00 | 1.10.10.2450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 38.0 | 3.04e-01 | 87.0% | 90.6% |
ECOD (98)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3941725 | 304.28.1.3 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD-TM1 | 0.92 | 85.0 | 7.15e-01 | 100.0% | 72.9% |
| 3964348 | 304.28.1.3 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD-TM1 | 0.91 | 84.0 | 7.45e-01 | 100.0% | 84.0% |
| 4004813 | 304.28.1.3 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD-TM1 | 0.91 | 84.0 | 6.83e-01 | 100.0% | 64.2% |
| 4101334 | 304.28.1.3 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD-TM1 | 0.87 | 79.0 | 6.61e-01 | 100.0% | 67.8% |
| 3798285 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.86 | 77.0 | 6.74e-01 | 100.0% | 76.2% |
| 3627142 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.85 | 76.0 | 4.38e-01 | 100.0% | 12.7% |
| 4948443 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.84 | 76.0 | 5.42e-01 | 100.0% | 40.7% |
| 5082595 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.84 | 76.0 | 7.12e-01 | 100.0% | 92.3% |
| 3581763 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.84 | 74.0 | 6.79e-01 | 100.0% | 81.4% |
| 5072747 | 304.120.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer | 0.83 | 68.0 | 6.53e-01 | 88.9% | 78.3% |
| 3214530 | 304.9.1.86 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF26088 | 0.83 | 75.0 | 6.04e-01 | 100.0% | 57.0% |
| 4985138 | 304.120.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer | 0.82 | 73.0 | 6.24e-01 | 98.1% | 80.0% |
| 3976720 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.82 | 72.0 | 6.64e-01 | 100.0% | 75.7% |
| 4972484 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.82 | 72.0 | 5.81e-01 | 100.0% | 64.8% |
| 4940257 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.82 | 72.0 | 6.67e-01 | 100.0% | 82.9% |
| 4362064 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.82 | 72.0 | 6.59e-01 | 100.0% | 75.7% |
| 4930178 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.82 | 72.0 | 5.71e-01 | 100.0% | 63.6% |
| 4507904 | 304.120.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer | 0.81 | 74.0 | 6.57e-01 | 100.0% | 89.3% |
| 4990073 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.81 | 72.0 | 6.59e-01 | 100.0% | 82.9% |
| 4316392 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.81 | 71.0 | 6.58e-01 | 100.0% | 78.6% |
| 5082425 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.80 | 71.0 | 5.79e-01 | 100.0% | 70.0% |
| 3512130 | 246.3.1.4 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 | 0.80 | 71.0 | 4.11e-01 | 100.0% | 12.8% |
| 3223173 | 304.9.1.17 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF1866 | 0.80 | 70.0 | 6.05e-01 | 100.0% | 72.9% |
| 5076763 | 304.120.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer | 0.80 | 71.0 | 6.34e-01 | 98.1% | 86.7% |
| 4947994 | 1036.1.1.0 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain | 0.80 | 70.0 | 5.66e-01 | 100.0% | 66.7% |
| 3392977 | 304.55.2.9 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › DUF4780 | 0.80 | 69.0 | 5.89e-01 | 100.0% | 77.8% |
| 1036625 | 3122.1.1.1 ↗ | a+b complex topology › MESD › MESD › MESD › Mesd | 0.80 | 70.0 | 6.22e-01 | 100.0% | 82.1% |
| 4957408 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.79 | 70.0 | 5.63e-01 | 100.0% | 67.6% |
| 3739487 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.79 | 69.0 | 5.96e-01 | 100.0% | 67.1% |
| 4226339 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.78 | 69.0 | 6.36e-01 | 100.0% | 80.0% |
| 3924693 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.78 | 69.0 | 5.70e-01 | 100.0% | 63.2% |
| 5080834 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.78 | 68.0 | 5.48e-01 | 100.0% | 65.7% |
| 5023739 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.77 | 67.0 | 5.44e-01 | 100.0% | 66.7% |
| 3187758 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.77 | 67.0 | 5.82e-01 | 100.0% | 83.5% |
| 3227692 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.76 | 68.0 | 5.70e-01 | 100.0% | 66.7% |
| 3741625 | 304.9.1.38 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SET_assoc | 0.76 | 67.0 | 5.26e-01 | 100.0% | 51.3% |
| 4109532 | 304.9.1.178 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SET_assoc, SET1_RBD | 0.76 | 67.0 | 4.28e-01 | 100.0% | 22.7% |
| 162430 | 304.9.1.17 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF1866 | 0.76 | 66.0 | 5.63e-01 | 100.0% | 70.3% |
| 4956226 | 304.120.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer | 0.76 | 67.0 | 6.03e-01 | 100.0% | 86.7% |
| 1481304 | 304.5.1.4 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CdAMP_rec | 0.76 | 66.0 | 6.53e-01 | 100.0% | 93.1% |
| 4214198 | 304.9.1.38 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SET_assoc | 0.76 | 66.0 | 5.70e-01 | 100.0% | 67.1% |
| 5050432 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.76 | 63.0 | 5.16e-01 | 100.0% | 62.7% |
| 3389845 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.75 | 66.0 | 6.08e-01 | 100.0% | 80.0% |
| 5025078 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.75 | 65.0 | 5.26e-01 | 100.0% | 66.7% |
| 3393465 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.74 | 66.0 | 5.29e-01 | 100.0% | 58.1% |
| 3627238 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.74 | 64.0 | 4.23e-01 | 100.0% | 43.0% |
| 5049234 | 2.1.1.374 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF2110_C | 0.74 | 58.0 | 4.13e-01 | 87.0% | 30.3% |
| 4932518 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.74 | 64.0 | 5.38e-01 | 100.0% | 56.8% |
| 5030373 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.74 | 63.0 | 5.35e-01 | 100.0% | 62.1% |
| 4937870 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.74 | 63.0 | 5.31e-01 | 100.0% | 66.3% |
| 3254951 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.74 | 65.0 | 5.33e-01 | 100.0% | 59.2% |
| 3708065 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.74 | 64.0 | 5.87e-01 | 100.0% | 78.1% |
| 4309637 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.73 | 65.0 | 5.61e-01 | 100.0% | 64.3% |
| 3404078 | 304.9.1.17 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF1866 | 0.73 | 63.0 | 5.21e-01 | 100.0% | 70.0% |
| 3255461 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.73 | 62.0 | 5.41e-01 | 100.0% | 71.8% |
| 3578641 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.72 | 62.0 | 5.78e-01 | 100.0% | 84.3% |
| 3686069 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.72 | 62.0 | 4.91e-01 | 100.0% | 51.3% |
| 3704482 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.72 | 62.0 | 5.64e-01 | 100.0% | 90.7% |
| 3508059 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.72 | 62.0 | 4.79e-01 | 100.0% | 45.6% |
| 4559752 | 242.1.1.6 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA | 0.71 | 57.0 | 4.90e-01 | 90.7% | 57.8% |
| 4976695 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.71 | 61.0 | 5.22e-01 | 100.0% | 61.1% |
| 4945605 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.71 | 62.0 | 5.86e-01 | 100.0% | 84.6% |
| 3230011 | 6106.1.1.0 ↗ | extended segments › Photosystem II protein Y, psbY › Photosystem II protein Y, psbY › Photosystem II protein Y, psbY | 0.71 | 57.0 | 4.94e-01 | 88.9% | 68.2% |
| 3619277 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.71 | 61.0 | 5.23e-01 | 100.0% | 66.7% |
| 3908746 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.71 | 61.0 | 5.44e-01 | 100.0% | 70.0% |
| 1107972 | 304.26.1.2 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Ykof | 0.70 | 61.0 | 5.08e-01 | 100.0% | 59.2% |
| 4006107 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.70 | 59.0 | 5.43e-01 | 100.0% | 80.0% |
| 3593851 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.70 | 61.0 | 5.39e-01 | 100.0% | 71.2% |
| 4401105 | 304.138.1.0 ↗ | a+b two layers › Alpha-beta plaits | 0.70 | 57.0 | 5.71e-01 | 98.1% | 90.9% |
| 3170900 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.70 | 59.0 | 4.73e-01 | 100.0% | 50.4% |
| 3671594 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.70 | 60.0 | 5.43e-01 | 100.0% | 76.0% |
| 4946891 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.69 | 59.0 | 5.51e-01 | 100.0% | 78.6% |
| 3919669 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.69 | 58.0 | 4.74e-01 | 100.0% | 54.5% |
| 3881758 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.69 | 58.0 | 5.10e-01 | 100.0% | 70.6% |
| 4277480 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.69 | 60.0 | 4.86e-01 | 100.0% | 54.3% |
| 3163733 | 304.24.1.2 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF1949 | 0.69 | 60.0 | 5.52e-01 | 100.0% | 77.1% |
| 138899 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.69 | 57.0 | 5.15e-01 | 100.0% | 76.2% |
| 2430406 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.68 | 59.0 | 5.44e-01 | 100.0% | 81.7% |
| 4188738 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.68 | 57.0 | 5.05e-01 | 100.0% | 68.2% |
| 4032264 | 304.8.1.94 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DrrA1-3_C | 0.68 | 55.0 | 5.23e-01 | 100.0% | 76.9% |
| 3253177 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.68 | 60.0 | 5.51e-01 | 100.0% | 77.1% |
| 3968877 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.68 | 57.0 | 5.23e-01 | 100.0% | 78.7% |
| 5064038 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.68 | 57.0 | 5.07e-01 | 100.0% | 66.3% |
| 3914416 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.67 | 58.0 | 4.70e-01 | 100.0% | 51.8% |
| 4955127 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.67 | 57.0 | 5.31e-01 | 100.0% | 78.6% |
| 3593062 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.67 | 59.0 | 4.69e-01 | 100.0% | 51.8% |
| 5029252 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.66 | 53.0 | 4.15e-01 | 90.7% | 43.3% |
| 3704446 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.66 | 58.0 | 4.65e-01 | 100.0% | 51.8% |
| 5000336 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.66 | 54.0 | 5.34e-01 | 100.0% | 91.7% |
| 4947478 | 304.26.1.0 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like | 0.65 | 55.0 | 4.71e-01 | 100.0% | 65.3% |
| 4078674 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.65 | 55.0 | 5.41e-01 | 100.0% | 95.0% |
| 3172521 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.65 | 56.0 | 5.10e-01 | 100.0% | 80.0% |
| 4465071 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.65 | 54.0 | 4.72e-01 | 100.0% | 62.2% |
| 3936431 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.64 | 54.0 | 4.75e-01 | 100.0% | 69.4% |
| 3437099 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.64 | 55.0 | 4.67e-01 | 100.0% | 72.3% |
| 164037 | 4340.1.1.1 ↗ | a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb5 | 0.61 | 49.0 | 4.60e-01 | 100.0% | 73.0% |
| 4025269 | 310.1.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain | 0.60 | 43.0 | 3.39e-01 | 79.6% | 59.2% |
| 3941213 | 101.1.2.506 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 | 0.52 | 38.0 | 3.26e-01 | 85.2% | 70.0% |