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qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00255
Bact-Virqs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00255
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-97
Domain cluster:
rep: ON456331.1__UTN91252.1__SEA_POKYPUPPY_93__00092__D34-111
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n8hA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.65 | 41.0 | 4.45e-01 | 97.8% | 77.6% |
| 2essA02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.63 | 48.0 | 4.75e-01 | 100.0% | 74.7% |
| 3dpuB03 | 3.30.310.200 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.63 | 45.0 | 4.27e-01 | 73.1% | 82.4% |
| 3d9wA02 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.62 | 46.0 | 4.53e-01 | 80.6% | 96.1% |
| 3bdrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 46.0 | 3.92e-01 | 80.6% | 89.7% |
| 3pquA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.61 | 46.0 | 3.75e-01 | 80.6% | 88.1% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.61 | 35.0 | 4.15e-01 | 80.6% | 84.1% |
| 3eqvA02 | 3.30.450.330 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.60 | 52.0 | 4.69e-01 | 98.9% | 71.4% |
| 6kghA02 | 3.30.450.330 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.60 | 53.0 | 4.49e-01 | 98.9% | 71.4% |
| 5bp3B00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.59 | 44.0 | 3.09e-01 | 100.0% | 25.5% |
| 3bbjA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.59 | 46.0 | 3.23e-01 | 100.0% | 28.1% |
| 1b96A00 | 3.40.600.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II | 0.59 | 53.0 | 3.87e-01 | 97.8% | 37.7% |
| 3holA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 43.0 | 3.65e-01 | 79.6% | 89.2% |
| 2la7A01 | 2.40.128.270 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 42.0 | 3.81e-01 | 77.4% | 90.6% |
| 3u0aA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.57 | 45.0 | 3.24e-01 | 100.0% | 30.1% |
| 1c8uA02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 44.0 | 4.13e-01 | 98.9% | 66.1% |
| 2cxhA01 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.57 | 50.0 | 4.12e-01 | 100.0% | 89.7% |
| 1ci9A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.56 | 49.0 | 3.31e-01 | 100.0% | 94.7% |
| 4w78F00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 42.0 | 3.81e-01 | 100.0% | 59.1% |
| 3uaqB02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 40.0 | 3.44e-01 | 78.5% | 100.0% |
| 5byuA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 45.0 | 4.10e-01 | 100.0% | 65.6% |
| 2eenA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.54 | 40.0 | 3.20e-01 | 76.3% | 78.0% |
| 3lw3B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 42.0 | 3.72e-01 | 100.0% | 56.9% |
| 3rd7A00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.54 | 47.0 | 3.33e-01 | 100.0% | 32.0% |
| 2qikA02 | 3.10.490.10 | Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like | 0.54 | 43.0 | 3.73e-01 | 89.2% | 68.8% |
| 4mveA00 | 2.40.128.580 | Mainly Beta › Beta Barrel › Lipocalin › GXWXG domain | 0.54 | 39.0 | 3.44e-01 | 77.4% | 73.5% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.54 | 46.0 | 3.48e-01 | 100.0% | 94.9% |
| 2dslA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 44.0 | 4.09e-01 | 100.0% | 71.3% |
| 3eetA02 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.53 | 44.0 | 3.66e-01 | 90.3% | 86.9% |
| 2hx5A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 48.0 | 4.17e-01 | 100.0% | 67.1% |
| 2f3xA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 42.0 | 3.62e-01 | 98.9% | 55.2% |
| 2hboA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 42.0 | 3.74e-01 | 98.9% | 60.2% |
| 2rk0A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 46.0 | 4.28e-01 | 100.0% | 95.0% |
| 2gf6A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 45.0 | 4.05e-01 | 100.0% | 66.9% |
| 2nwiB00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.52 | 43.0 | 3.66e-01 | 89.2% | 79.7% |
| 2ewvA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 41.0 | 4.01e-01 | 84.9% | 93.1% |
| 1ud9A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.52 | 45.0 | 3.43e-01 | 100.0% | 96.3% |
| 3jvvA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 40.0 | 3.97e-01 | 83.9% | 98.0% |
| 6rpxA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 33.0 | 3.50e-01 | 96.8% | 71.8% |
| 2oiwA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 45.0 | 3.95e-01 | 100.0% | 66.2% |
| 2egjA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 46.0 | 4.13e-01 | 100.0% | 72.2% |
| 2oafB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 45.0 | 3.91e-01 | 100.0% | 63.2% |
| 4y2fA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 44.0 | 3.87e-01 | 98.9% | 63.6% |
| 4qfwA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.51 | 43.0 | 3.12e-01 | 100.0% | 33.1% |
| 3kh8B01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 46.0 | 3.85e-01 | 98.9% | 59.7% |
| 3besR01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 3.69e-01 | 84.9% | 80.7% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4963533 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.72 | 41.0 | 3.73e-01 | 80.6% | 42.5% |
| 3957126 | 244.2.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | 0.69 | 39.0 | 4.11e-01 | 98.9% | 61.2% |
| 3279316 | 244.2.1.5 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Reductase_C | 0.68 | 39.0 | 4.32e-01 | 100.0% | 70.7% |
| 3386971 | 3675.1.1.0 ↗ | a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain | 0.67 | 50.0 | 4.43e-01 | 100.0% | 55.4% |
| 3672678 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.64 | 44.0 | 4.60e-01 | 100.0% | 77.6% |
| 3633647 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.64 | 33.0 | 3.91e-01 | 93.5% | 70.8% |
| 3810236 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.64 | 33.0 | 2.73e-01 | 88.2% | 26.7% |
| 5040071 | 244.2.1.7 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rubredoxin_C | 0.64 | 37.0 | 3.92e-01 | 100.0% | 62.4% |
| 1505941 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.63 | 38.0 | 3.62e-01 | 82.8% | 51.9% |
| 3244701 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.63 | 56.0 | 4.51e-01 | 100.0% | 53.9% |
| 5028385 | 316.1.1.18 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii | 0.61 | 53.0 | 4.14e-01 | 100.0% | 43.0% |
| 4939506 | 244.2.1.7 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rubredoxin_C | 0.61 | 38.0 | 3.73e-01 | 100.0% | 55.2% |
| 3574392 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 47.0 | 4.34e-01 | 84.9% | 75.0% |
| 4240410 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 42.0 | 3.56e-01 | 90.3% | 45.3% |
| 3840359 | 244.2.1.7 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rubredoxin_C | 0.59 | 39.0 | 3.75e-01 | 100.0% | 57.4% |
| 3886961 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.58 | 46.0 | 4.18e-01 | 98.9% | 64.2% |
| 4976853 | 220.5.1.1 ↗ | beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N | 0.58 | 45.0 | 4.13e-01 | 81.7% | 91.7% |
| 3183643 | 243.9.1.4 ↗ | a+b two layers › Cystatin-like › Nuclease A inhibitor (NuiA)-related › Nuclease A inhibitor (NuiA)-related › NuiA_2 | 0.58 | 52.0 | 4.83e-01 | 100.0% | 97.5% |
| 5051349 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.58 | 45.0 | 3.95e-01 | 84.9% | 70.3% |
| 3487132 | 244.2.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | 0.57 | 38.0 | 3.78e-01 | 100.0% | 64.0% |
| 3744541 | 220.1.1.196 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SPO71 | 0.57 | 45.0 | 3.80e-01 | 86.0% | 80.6% |
| 1679996 | 11.2.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › IcmF_C | 0.57 | 42.0 | 4.03e-01 | 79.6% | 99.1% |
| 3291210 | 9.23.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 | 0.56 | 41.0 | 3.62e-01 | 78.5% | 76.6% |
| 4989530 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.56 | 49.0 | 4.14e-01 | 98.9% | 58.1% |
| 3785371 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.56 | 45.0 | 3.95e-01 | 86.0% | 71.1% |
| 3482507 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.55 | 42.0 | 2.67e-01 | 80.6% | 94.0% |
| 3513019 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.55 | 48.0 | 3.51e-01 | 93.5% | 42.0% |
| 3216165 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 44.0 | 4.21e-01 | 84.9% | 82.9% |
| 4889524 | 222.1.1.29 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl_transf_1, MaoC_dehydratas | 0.55 | 44.0 | 3.85e-01 | 98.9% | 58.5% |
| 3476051 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 43.0 | 3.76e-01 | 84.9% | 70.3% |
| 4927178 | 223.1.1.6 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 | 0.55 | 49.0 | 3.55e-01 | 100.0% | 40.4% |
| 5044385 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.54 | 49.0 | 3.77e-01 | 100.0% | 94.3% |
| 4079979 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.54 | 37.0 | 3.81e-01 | 100.0% | 73.3% |
| 3909061 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 42.0 | 4.10e-01 | 86.0% | 73.3% |
| 3609512 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 48.0 | 4.12e-01 | 97.8% | 66.9% |
| 3696318 | 5.1.4.249 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_pof12 | 0.54 | 39.0 | 2.64e-01 | 78.5% | 99.0% |
| 5049089 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 48.0 | 4.44e-01 | 100.0% | 78.3% |
| 3285421 | 9.14.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W | 0.53 | 42.0 | 3.65e-01 | 84.9% | 77.9% |
| 3707456 | 223.2.1.10 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA | 0.53 | 46.0 | 3.93e-01 | 97.8% | 81.9% |
| 3948528 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 45.0 | 4.25e-01 | 94.6% | 86.4% |
| 3516524 | 3680.1.1.1 ↗ | a+b complex topology › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › SARA_C | 0.52 | 44.0 | 3.78e-01 | 97.8% | 58.6% |
| 3742330 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.52 | 43.0 | 4.00e-01 | 94.6% | 73.0% |
| 5051010 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 43.0 | 4.09e-01 | 100.0% | 77.3% |
| 4027965 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 41.0 | 2.86e-01 | 88.2% | 99.1% |
| 3682205 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 38.0 | 3.24e-01 | 77.4% | 51.0% |
| 4088887 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.51 | 37.0 | 3.57e-01 | 89.2% | 65.5% |
| 4040795 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.51 | 37.0 | 3.55e-01 | 90.3% | 65.5% |
| 5046979 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 37.0 | 3.50e-01 | 77.4% | 64.5% |
| 4096596 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 44.0 | 2.86e-01 | 100.0% | 20.2% |
| 3194295 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.51 | 38.0 | 3.49e-01 | 92.5% | 60.0% |
| 5024071 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 42.0 | 3.94e-01 | 98.9% | 73.0% |
| 3721374 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.50 | 35.0 | 3.41e-01 | 88.2% | 65.0% |