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qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00398

Bact-Vir

qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00398

Identity

Kingdom:
phage

Quality

82.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-206
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00777.24 best Glyco_transf_29 26.8 4.70e-06 63.5% 35.4%
PF00777.24 Glyco_transf_29 62.2 7.30e-17 43.9% 20.7%
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4js1A00 3.90.1480.20 Alpha Beta › Alpha-Beta Complex › sialyltransferase cstii, chain A › Glycosyl transferase family 29 0.82 78.0 6.36e-01 99.5% 67.6%
2wmlA00 3.90.1480.20 Alpha Beta › Alpha-Beta Complex › sialyltransferase cstii, chain A › Glycosyl transferase family 29 0.81 78.0 6.66e-01 100.0% 67.8%
5bo7B00 3.90.1480.20 Alpha Beta › Alpha-Beta Complex › sialyltransferase cstii, chain A › Glycosyl transferase family 29 0.76 73.0 6.24e-01 100.0% 71.7%
7pvaB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 31.0 3.81e-01 72.5% 72.3%
1p5jA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 27.0 3.61e-01 77.2% 81.2%
2j8zA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 40.0 4.53e-01 85.2% 93.1%
4pagA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.55 34.0 3.84e-01 96.8% 81.6%
3k32B00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 38.0 3.75e-01 89.9% 66.3%
4dccA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 34.0 3.95e-01 99.5% 88.4%
3crnA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 31.0 3.69e-01 72.5% 81.4%
6ilsA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.54 49.0 4.12e-01 97.9% 97.1%
1yb5A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 38.0 4.06e-01 96.8% 81.5%
2iyeA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 36.0 3.96e-01 91.5% 81.5%
2qxyA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 31.0 3.83e-01 72.5% 89.9%
6jtdA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 40.0 3.60e-01 78.3% 75.2%
1d5wA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 30.0 3.64e-01 72.5% 84.6%
2zayA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 31.0 3.78e-01 72.5% 89.4%
4tkzA00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.53 26.0 3.12e-01 100.0% 66.2%
3hdvB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 31.0 3.73e-01 72.5% 87.3%
3snkA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 31.0 3.80e-01 73.0% 92.4%
2pl1A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 31.0 3.75e-01 72.5% 90.8%
3gt7A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 31.0 3.67e-01 72.5% 84.1%
3kb6A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 32.0 3.70e-01 72.5% 85.5%
1p2fA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 30.0 3.63e-01 72.5% 88.2%
7lzaA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 31.0 3.74e-01 72.5% 92.4%
2qzjA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 31.0 3.68e-01 73.0% 89.3%
3gl9A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 31.0 3.73e-01 72.5% 91.7%
4nicA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 30.0 3.70e-01 72.5% 91.5%
3m6mD00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 31.0 3.83e-01 72.5% 94.9%
3lufB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 31.0 3.68e-01 72.5% 88.1%
4ldaB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 31.0 3.67e-01 73.0% 87.4%
4myrC00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 31.0 3.72e-01 72.5% 89.7%
2qvgA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 33.0 3.96e-01 73.0% 96.1%
4d6yA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 31.0 3.71e-01 73.0% 90.9%
2wb4B01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 31.0 2.77e-01 73.0% 40.4%
1k68A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 34.0 3.94e-01 73.0% 91.4%
3breB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 31.0 3.53e-01 73.0% 79.0%
3rqiA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 30.0 3.56e-01 72.5% 85.0%
4dadA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 30.0 3.59e-01 72.5% 85.9%
3b2nA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 30.0 3.69e-01 72.5% 91.7%
1orrC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 43.0 3.50e-01 88.4% 76.7%
2ljaA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 30.0 3.25e-01 72.5% 68.4%
1ab5A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 31.0 3.63e-01 72.5% 88.8%
5o8zB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 31.0 3.56e-01 72.5% 80.9%
4zylB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 35.0 3.92e-01 73.0% 91.0%
3cfyA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 31.0 3.61e-01 72.5% 86.9%
1mg5A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 44.0 3.96e-01 92.6% 89.8%
4gkbA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 44.0 4.01e-01 93.1% 89.1%
3guyA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 42.0 4.11e-01 87.8% 81.9%
8d88A01 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.50 46.0 4.17e-01 100.0% 91.3%
1reqB02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.50 30.0 3.50e-01 91.5% 81.3%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3348117 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.86 75.0 5.99e-01 100.0% 50.0%
3756908 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.86 83.0 7.15e-01 100.0% 81.1%
3569432 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.85 82.0 7.16e-01 100.0% 83.4%
3862284 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.85 82.0 6.81e-01 100.0% 68.7%
3663063 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.84 81.0 6.42e-01 100.0% 67.2%
3646512 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.84 81.0 6.82e-01 100.0% 80.3%
3776013 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.84 80.0 6.56e-01 100.0% 64.4%
3842996 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.84 81.0 6.57e-01 100.0% 67.7%
4125699 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.83 80.0 6.74e-01 100.0% 72.8%
3910916 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.83 80.0 6.68e-01 100.0% 71.9%
3876385 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.83 78.0 6.36e-01 99.5% 67.8%
3529503 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.82 78.0 6.63e-01 100.0% 72.8%
3921041 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.82 78.0 6.45e-01 100.0% 71.6%
119283 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.81 78.0 6.66e-01 100.0% 67.8%
3859536 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.81 77.0 6.31e-01 99.5% 67.5%
3393202 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.81 78.0 6.34e-01 100.0% 68.1%
3676460 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.77 73.0 6.14e-01 100.0% 65.7%
1567023 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.76 73.0 6.24e-01 100.0% 71.7%
5028587 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.60 41.0 4.70e-01 100.0% 93.6%
4947943 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.59 39.0 4.42e-01 89.4% 88.6%
4932904 2003.4.1.1 a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP 0.58 32.0 4.15e-01 95.2% 95.2%
5051491 2006.1.4.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN 0.58 40.0 4.62e-01 100.0% 97.0%
3305746 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.58 30.0 3.70e-01 73.0% 78.0%
3287967 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.57 30.0 3.62e-01 72.5% 76.7%
4973021 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.53 31.0 3.54e-01 73.0% 75.2%
140201 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.53 30.0 3.78e-01 72.5% 90.6%
4336279 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.53 31.0 3.54e-01 72.5% 75.9%
364332 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.52 31.0 3.75e-01 72.5% 88.7%
4139428 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.52 31.0 3.74e-01 72.5% 90.0%
3434103 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.52 31.0 3.78e-01 72.5% 91.7%
4269582 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.52 31.0 3.66e-01 72.5% 84.6%
4938248 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.52 32.0 3.76e-01 72.5% 89.6%
2476521 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.52 31.0 3.64e-01 72.5% 84.0%
4944956 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.52 32.0 3.81e-01 73.0% 90.0%
4939118 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.52 31.0 3.71e-01 72.5% 90.8%
3970353 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.51 31.0 3.66e-01 73.0% 87.2%
4962383 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.51 32.0 3.38e-01 73.0% 69.1%
3948536 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.51 31.0 3.58e-01 72.5% 82.2%
1087540 2007.1.3.9 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › TadZ_N 0.51 31.0 3.65e-01 73.0% 86.7%
3283456 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.51 31.0 3.57e-01 72.5% 80.7%
4110092 7570.1.1.1 a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C 0.51 37.0 4.15e-01 97.4% 97.9%
4253774 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.51 31.0 3.54e-01 72.5% 81.5%
4279021 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.51 31.0 3.62e-01 73.0% 86.2%
4291338 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.51 30.0 3.44e-01 72.5% 77.9%
4327073 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.51 30.0 3.54e-01 72.5% 83.8%
None 0.50 32.0 3.32e-01 72.5% 67.1%
4649560 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.50 30.0 3.47e-01 72.5% 79.3%
3505423 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.50 31.0 3.72e-01 72.5% 92.0%
4124054 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.50 31.0 3.43e-01 72.5% 75.3%
3838886 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.50 30.0 3.49e-01 73.0% 83.1%
149841 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.50 31.0 3.64e-01 72.5% 87.7%
3663935 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.50 31.0 3.66e-01 73.0% 89.1%
3281685 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.50 31.0 3.49e-01 73.0% 80.7%