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qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00436
Bact-Virqs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00436
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-132
Domain cluster:
rep: sw_7_scaffold_1_prodigal-single.1__X__X__00333__D2-107
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qsbA00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.64 | 38.0 | 4.64e-01 | 98.5% | 91.8% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.63 | 38.0 | 4.77e-01 | 96.9% | 98.7% |
| 4ceiA03 | 6.10.250.2380 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.60 | 40.0 | 4.34e-01 | 97.7% | 79.5% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 27.0 | 3.36e-01 | 74.0% | 67.1% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.59 | 40.0 | 4.47e-01 | 97.7% | 89.2% |
| 3i2fA02 | 1.10.3020.10 | Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) | 0.56 | 30.0 | 3.42e-01 | 97.7% | 68.4% |
| 2zt5A02 | 3.30.40.230 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.56 | 28.0 | 3.53e-01 | 96.2% | 77.4% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.55 | 28.0 | 3.59e-01 | 94.7% | 83.5% |
| 1r2jA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.53 | 37.0 | 3.68e-01 | 97.7% | 66.7% |
| 2qf9A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 42.0 | 3.97e-01 | 87.0% | 92.9% |
| 3pvtA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 42.0 | 3.28e-01 | 93.1% | 63.2% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3875632 | 5054.1.1.63 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, YVC1_C | 0.62 | 45.0 | 3.22e-01 | 74.8% | 42.5% |
| 3654270 | 611.7.1.15 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Rx_N | 0.60 | 46.0 | 4.56e-01 | 98.5% | 77.0% |
| 4972401 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.59 | 42.0 | 3.61e-01 | 73.3% | 85.6% |
| 4085902 | 611.7.1.13 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › PUB10_N | 0.59 | 45.0 | 4.30e-01 | 96.9% | 68.4% |
| 4429835 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.58 | 41.0 | 4.74e-01 | 78.6% | 96.0% |
| 3298712 | 611.7.1.13 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › PUB10_N | 0.58 | 44.0 | 4.36e-01 | 96.9% | 75.7% |
| 3485540 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.57 | 36.0 | 3.28e-01 | 71.8% | 46.9% |
| 4014485 | 5044.1.1.0 ↗ | extended segments › PsbZ-like › PsbZ-like › PsbZ-like | 0.56 | 37.0 | 4.31e-01 | 79.4% | 92.6% |
| 3731535 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.56 | 37.0 | 4.09e-01 | 77.9% | 87.0% |
| 3098420 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.56 | 41.0 | 4.51e-01 | 80.2% | 90.8% |
| 3612151 | 1189.1.1.2 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG_B | 0.56 | 46.0 | 3.62e-01 | 90.1% | 92.6% |
| 3418913 | 611.7.1.1 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › MLKL_N | 0.55 | 38.0 | 3.82e-01 | 86.3% | 69.6% |
| 3651030 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.55 | 43.0 | 3.91e-01 | 96.9% | 62.3% |
| 3715197 | 109.4.1.222 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DCB | 0.54 | 39.0 | 3.38e-01 | 98.5% | 48.3% |
| 3257419 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.54 | 36.0 | 3.76e-01 | 97.7% | 74.2% |
| 3608572 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.52 | 45.0 | 3.93e-01 | 95.4% | 92.0% |
| 3648197 | 3755.4.1.17 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Rx_N | 0.52 | 42.0 | 3.95e-01 | 87.8% | 73.1% |
| 4942070 | 5050.1.1.87 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › LPG_synthase_TM | 0.51 | 38.0 | 3.14e-01 | 78.6% | 76.4% |
| 4947622 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.51 | 40.0 | 4.04e-01 | 97.7% | 82.2% |
| 3285516 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.50 | 26.0 | 3.14e-01 | 74.0% | 75.3% |
| 3410818 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.50 | 35.0 | 3.63e-01 | 96.2% | 76.0% |