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qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00512

Bact-Vir

qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00512

Identity

Kingdom:
phage

Quality

92.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-93
PDB
Domain cluster: representative
CATH (73)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.75 56.0 5.26e-01 77.5% 94.7%
1ej6A02 3.55.60.10 Alpha Beta › 3-Layer(bab) Sandwich › Reovirus components fold › Reovirus components 0.73 66.0 5.32e-01 98.8% 87.8%
3evzA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 54.0 4.23e-01 88.7% 39.8%
2zfuA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 52.0 4.15e-01 85.0% 39.8%
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.69 58.0 4.40e-01 97.5% 38.7%
1zkdA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 48.0 3.76e-01 86.3% 35.5%
3dp7A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 53.0 4.19e-01 87.5% 41.5%
2dt9A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.67 46.0 4.77e-01 80.0% 77.0%
4pioA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 49.0 3.79e-01 87.5% 35.4%
2ip2A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 54.0 3.79e-01 88.7% 35.8%
3grzB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 48.0 3.63e-01 88.7% 32.1%
2dchX01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.65 57.0 5.46e-01 96.2% 82.8%
2pa8D01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.65 44.0 4.28e-01 78.8% 63.6%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.65 47.0 5.07e-01 85.0% 91.0%
2pc1A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 47.0 3.68e-01 93.8% 35.8%
4nzrM03 3.30.110.180 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.64 53.0 4.60e-01 90.0% 65.0%
3dfeA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 45.0 4.52e-01 73.8% 96.3%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.62 47.0 4.96e-01 100.0% 95.7%
3l4gC04 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.62 49.0 3.43e-01 87.5% 83.9%
3axfA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.62 40.0 3.51e-01 86.3% 43.7%
1x4dA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.61 40.0 3.76e-01 73.8% 52.9%
3ko2A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.61 53.0 4.29e-01 100.0% 51.6%
2n0kA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 47.0 4.52e-01 81.2% 96.6%
3gkuA03 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.61 44.0 4.65e-01 90.0% 88.7%
2cdqA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 44.0 4.37e-01 81.2% 73.8%
2ab5B01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.60 53.0 4.59e-01 100.0% 66.4%
1uv7A00 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.60 48.0 4.94e-01 88.7% 92.1%
1i6uA01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.60 44.0 4.66e-01 85.0% 91.2%
4aukA01 3.30.70.2810 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 38.0 3.91e-01 75.0% 64.6%
3vaxA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 47.0 4.54e-01 87.5% 88.4%
4pg4B03 3.30.70.3100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 40.0 4.16e-01 70.0% 98.7%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.60 42.0 4.38e-01 88.7% 81.3%
2cqiA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.60 39.0 3.62e-01 71.2% 51.5%
3luyA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.59 44.0 3.95e-01 82.5% 55.2%
1dq3A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.59 49.0 4.83e-01 93.8% 86.2%
3i4pA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.59 38.0 3.77e-01 70.0% 63.1%
2bueA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 45.0 3.54e-01 95.0% 37.4%
2efpA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.58 40.0 3.74e-01 71.2% 58.2%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.58 41.0 4.22e-01 88.7% 79.5%
1s2oA02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.58 43.0 4.52e-01 87.5% 91.5%
2ia0B02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.57 39.0 3.69e-01 71.2% 59.6%
2j0wA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 41.0 4.14e-01 81.2% 75.3%
1nf2A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.57 45.0 4.18e-01 87.5% 88.7%
2gqqA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.57 38.0 3.73e-01 70.0% 63.5%
4hlyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 47.0 4.38e-01 95.0% 100.0%
3pgvA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.57 45.0 4.24e-01 87.5% 92.1%
2bolA03 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 47.0 4.45e-01 88.7% 100.0%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.57 49.0 4.56e-01 98.8% 78.6%
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.57 49.0 4.81e-01 98.8% 89.7%
2wb8A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 43.0 3.47e-01 82.5% 71.4%
3pqvC01 3.65.10.20 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › RNA 3'-terminal phosphate cyclase domain 0.56 47.0 3.44e-01 100.0% 98.8%
2lxfA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 41.0 3.62e-01 78.8% 79.3%
7cayA01 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.56 49.0 4.61e-01 98.8% 79.0%
1vq8S00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.55 43.0 4.35e-01 85.0% 84.0%
3dxqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 38.0 3.86e-01 81.2% 71.1%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.55 43.0 4.32e-01 85.0% 82.9%
3juwA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 45.0 3.54e-01 91.3% 96.4%
3zduA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 41.0 4.28e-01 82.5% 86.8%
2aneH00 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.54 46.0 4.24e-01 98.8% 81.7%
6lpnA04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 36.0 3.47e-01 75.0% 58.9%
1vw4700 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.53 40.0 3.68e-01 83.7% 61.3%
2v4jB01 3.30.70.3340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 37.0 3.21e-01 76.2% 44.7%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 4.00e-01 98.8% 73.0%
2fswA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.86e-01 98.8% 69.6%
1u5tB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 4.16e-01 92.5% 100.0%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 4.02e-01 98.8% 82.0%
4binA01 2.60.40.3500 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 41.0 3.69e-01 90.0% 69.8%
4e1oA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.51 36.0 3.46e-01 75.0% 74.5%
3lmmA03 3.30.565.60 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › 0.51 42.0 3.32e-01 91.3% 84.2%
3ossD00 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 41.0 3.31e-01 88.7% 54.1%
2pblA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 39.0 2.88e-01 87.5% 49.4%
1u6mA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 44.0 3.40e-01 100.0% 46.6%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 39.0 3.85e-01 100.0% 82.8%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4116505 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.76 57.0 5.04e-01 90.0% 55.7%
5013983 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.72 58.0 5.08e-01 91.3% 58.3%
5031915 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.72 58.0 5.74e-01 96.2% 82.4%
4194345 2003.1.5.55 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA 0.72 52.0 3.82e-01 87.5% 30.0%
3970617 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.72 53.0 5.50e-01 88.7% 84.0%
4575751 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.71 58.0 5.56e-01 92.5% 78.9%
3602220 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.70 58.0 5.71e-01 95.0% 85.9%
5052596 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.70 60.0 5.57e-01 92.5% 78.0%
5009157 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.70 61.0 5.52e-01 97.5% 83.6%
3451456 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.70 51.0 4.79e-01 80.0% 64.2%
4050037 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.69 56.0 5.28e-01 98.8% 72.0%
5027648 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.69 56.0 5.57e-01 92.5% 84.7%
4979990 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.69 59.0 5.04e-01 98.8% 59.2%
3367684 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.68 47.0 4.68e-01 80.0% 68.2%
5044561 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.68 50.0 5.01e-01 86.3% 77.5%
5027652 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.68 54.0 5.18e-01 92.5% 74.7%
4937053 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.67 57.0 5.28e-01 92.5% 82.0%
5024972 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.67 50.0 5.02e-01 87.5% 80.0%
4998391 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.67 56.0 5.42e-01 92.5% 82.2%
4973504 2003.1.5.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ 0.66 51.0 4.02e-01 83.7% 40.0%
4591093 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.66 56.0 4.61e-01 90.0% 55.6%
3965787 304.8.1.53 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th 0.66 49.0 4.01e-01 80.0% 42.0%
5075416 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.66 57.0 5.20e-01 98.8% 71.8%
5075143 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 57.0 4.24e-01 96.2% 43.9%
3318862 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.66 48.0 4.71e-01 81.2% 71.8%
4549948 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.66 49.0 4.28e-01 80.0% 52.5%
4225656 2003.1.5.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 0.66 55.0 3.84e-01 90.0% 38.6%
4264348 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.66 44.0 4.56e-01 78.8% 73.3%
5029252 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.65 56.0 4.91e-01 98.8% 64.2%
1165035 320.1.1.2 a+b two layers › R3H domain-like › R3H domain › R3H domain › HP1451_C 0.65 47.0 5.04e-01 85.0% 89.7%
5013284 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.64 52.0 5.33e-01 88.7% 93.3%
4194812 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.64 48.0 4.19e-01 81.2% 53.3%
4043221 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 48.0 4.31e-01 81.2% 58.2%
3329478 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.63 47.0 4.16e-01 80.0% 53.3%
2553760 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.63 55.0 5.01e-01 97.5% 87.7%
3830475 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.63 43.0 4.13e-01 70.0% 82.2%
4354854 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 47.0 3.73e-01 81.2% 38.8%
4500961 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.62 54.0 5.34e-01 97.5% 91.8%
3321864 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 47.0 4.22e-01 80.0% 59.1%
3803779 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.62 42.0 4.38e-01 70.0% 94.7%
1211839 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.62 52.0 4.94e-01 95.0% 87.5%
3805518 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.61 40.0 4.10e-01 73.8% 68.8%
4028770 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.61 39.0 3.82e-01 73.8% 57.8%
4082856 304.37.1.1 a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 › NIR_SIR_ferr 0.61 40.0 4.14e-01 72.5% 72.0%
3220665 4014.1.1.1 a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV 0.61 46.0 3.59e-01 81.2% 37.7%
4248896 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.61 44.0 4.77e-01 90.0% 96.9%
3441274 304.8.1.47 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd 0.60 53.0 4.60e-01 100.0% 73.6%
4044009 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.60 45.0 4.14e-01 82.5% 90.0%
4978613 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.59 41.0 4.05e-01 73.8% 67.1%
5013279 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.59 49.0 5.03e-01 92.5% 100.0%
3290652 306.2.1.0 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor 0.59 47.0 4.61e-01 91.3% 81.1%
3891991 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.58 37.0 3.87e-01 72.5% 71.4%
3685642 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.58 46.0 4.61e-01 87.5% 100.0%
4372378 306.3.1.4 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › PFF1_C 0.58 43.0 4.23e-01 82.5% 74.1%
3660389 304.109.1.0 a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e 0.58 42.0 4.52e-01 78.8% 95.4%
4026290 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.57 38.0 3.55e-01 73.8% 54.0%
3688470 2003.1.5.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 0.57 41.0 2.86e-01 77.5% 50.7%
3422892 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.56 47.0 3.54e-01 97.5% 44.9%
3639815 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.56 41.0 3.19e-01 77.5% 60.6%
5029835 304.109.1.1 a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 0.55 45.0 3.97e-01 90.0% 60.0%
4988159 304.37.1.1 a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 › NIR_SIR_ferr 0.55 38.0 3.45e-01 76.2% 50.4%
5003264 304.109.1.1 a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 0.55 43.0 4.34e-01 88.7% 85.0%
3274720 206.1.1.49 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF5898 0.55 41.0 3.14e-01 81.2% 52.0%
4932501 304.109.1.0 a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e 0.55 44.0 4.15e-01 90.0% 71.0%
5083116 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.55 41.0 4.22e-01 87.5% 89.3%
2106290 304.109.1.1 a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 0.55 44.0 4.14e-01 90.0% 71.3%
3513343 304.109.1.2 a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23,Ribosomal_L23eN 0.54 44.0 3.92e-01 90.0% 60.0%
3725516 10.12.1.12 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › TauD 0.54 42.0 2.81e-01 87.5% 71.1%
140701 304.37.1.1 a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 › NIR_SIR_ferr 0.54 37.0 3.21e-01 76.2% 43.3%
3593122 304.109.1.0 a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e 0.54 46.0 4.01e-01 95.0% 62.5%
4012849 304.20.1.0 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain 0.54 46.0 3.73e-01 100.0% 78.8%
4645570 304.102.1.2 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD 0.54 45.0 3.45e-01 95.0% 86.7%
3595272 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.53 37.0 3.46e-01 80.0% 57.0%
4986352 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.53 41.0 4.28e-01 85.0% 98.6%
4978587 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.53 45.0 2.76e-01 97.5% 78.3%
4946524 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.89e-01 100.0% 67.3%
3926365 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.52 39.0 2.52e-01 87.5% 14.5%
4097357 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.52 37.0 2.74e-01 78.8% 43.5%
3659848 320.4.1.0 a+b two layers › R3H domain-like › PUB domain › PUB domain 0.52 43.0 3.80e-01 100.0% 64.4%
3617968 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 44.0 4.20e-01 96.2% 100.0%