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qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00593
Bact-Virqs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00593
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-88
Domain cluster:
rep: sw_7_scaffold_1_prodigal-single.1__X__X__00227__D1-77
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01817.27 best | CM_2 | 57.4 | 2.00e-15 | 87.2% | 93.8% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2d8dB00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.95 | 86.0 | 8.79e-01 | 94.2% | 100.0% |
| 1ecmB00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.93 | 86.0 | 8.24e-01 | 95.3% | 87.4% |
| 1ybzA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.89 | 73.0 | 7.74e-01 | 96.5% | 97.4% |
| 3rmiA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.85 | 78.0 | 7.30e-01 | 100.0% | 85.7% |
| 2vklA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.81 | 66.0 | 6.92e-01 | 91.9% | 97.4% |
| 3ooqA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.73 | 44.0 | 2.94e-01 | 87.2% | 17.9% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.71 | 45.0 | 4.84e-01 | 94.2% | 74.7% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 47.0 | 4.74e-01 | 91.9% | 70.5% |
| 1ma1A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.66 | 40.0 | 4.54e-01 | 82.6% | 81.2% |
| 2k9pA00 | 1.10.287.920 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Pheromone alpha factor receptor. | 0.66 | 44.0 | 4.62e-01 | 96.5% | 75.0% |
| 1txuA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.64 | 49.0 | 4.80e-01 | 82.6% | 80.9% |
| 1l3eB00 | 1.20.1020.10 | Mainly Alpha › Up-down Bundle › CREB-binding Protein; Chain A › TAZ domain | 0.63 | 36.0 | 3.47e-01 | 94.2% | 48.5% |
| 4mh6A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 50.0 | 4.00e-01 | 90.7% | 45.9% |
| 2rd0B00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 53.0 | 4.42e-01 | 90.7% | 56.1% |
| 4dhiB02 | 1.20.1300.20 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Peptidase C65 Otubain, subdomain 2 | 0.60 | 42.0 | 3.61e-01 | 74.4% | 53.1% |
| 4h79A00 | 1.10.520.40 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › CRISPR-associated protein Cse2 | 0.58 | 44.0 | 3.47e-01 | 81.4% | 45.2% |
| 6lumG01 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.57 | 41.0 | 3.80e-01 | 76.7% | 93.8% |
| 3solA00 | 1.20.58.1630 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS | 0.57 | 39.0 | 3.88e-01 | 79.1% | 67.0% |
| 1h2tC03 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 42.0 | 3.08e-01 | 89.5% | 33.9% |
| 7pluA01 | 1.20.58.530 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 43.0 | 3.98e-01 | 98.8% | 73.5% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4992636 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.97 | 94.0 | 8.64e-01 | 100.0% | 84.8% |
| 56856 | 164.1.1.0 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II | 0.95 | 83.0 | 8.66e-01 | 90.7% | 100.0% |
| 4296658 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.95 | 85.0 | 8.07e-01 | 93.0% | 84.7% |
| 4948274 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.95 | 73.0 | 7.78e-01 | 79.1% | 94.7% |
| 4948961 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.95 | 80.0 | 8.14e-01 | 88.4% | 92.9% |
| 5075474 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.94 | 77.0 | 8.04e-01 | 84.9% | 95.0% |
| 4932440 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.94 | 83.0 | 8.36e-01 | 91.9% | 96.5% |
| 4964930 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.94 | 85.0 | 8.57e-01 | 94.2% | 98.8% |
| 5011971 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.94 | 81.0 | 8.38e-01 | 89.5% | 100.0% |
| 5026124 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.94 | 67.0 | 7.67e-01 | 82.6% | 96.9% |
| 4521190 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.93 | 80.0 | 8.09e-01 | 89.5% | 97.6% |
| 5008279 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.93 | 84.0 | 8.07e-01 | 94.2% | 85.3% |
| 4134991 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.93 | 89.0 | 8.38e-01 | 100.0% | 88.0% |
| 4934951 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.93 | 88.0 | 8.68e-01 | 100.0% | 98.9% |
| 5082058 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.93 | 75.0 | 8.00e-01 | 83.7% | 100.0% |
| 5051498 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.92 | 87.0 | 8.61e-01 | 100.0% | 97.8% |
| 4927512 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.92 | 87.0 | 8.57e-01 | 100.0% | 98.9% |
| 4008532 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.92 | 79.0 | 8.02e-01 | 90.7% | 95.3% |
| 5074758 | 164.1.1.0 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II | 0.91 | 79.0 | 8.18e-01 | 90.7% | 100.0% |
| 5066382 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.91 | 85.0 | 8.33e-01 | 97.7% | 95.6% |
| 4983481 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.90 | 84.0 | 8.09e-01 | 100.0% | 94.7% |
| 1884774 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.89 | 83.0 | 8.31e-01 | 98.8% | 98.9% |
| 4936463 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.89 | 83.0 | 7.97e-01 | 98.8% | 92.6% |
| 3589699 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.86 | 75.0 | 7.77e-01 | 91.9% | 98.8% |
| 4936934 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.86 | 79.0 | 7.61e-01 | 97.7% | 90.5% |
| 2390101 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.83 | 70.0 | 7.37e-01 | 96.5% | 100.0% |
| 4263341 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.75 | 50.0 | 4.50e-01 | 95.3% | 51.3% |
| 5025813 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.74 | 50.0 | 4.57e-01 | 95.3% | 53.6% |
| 3840952 | 601.19.1.39 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › LIN9_C | 0.73 | 46.0 | 4.91e-01 | 87.2% | 73.3% |
| 4079591 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.71 | 48.0 | 4.41e-01 | 95.3% | 54.5% |
| 3880410 | 164.1.1.3 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › Get2_like | 0.70 | 60.0 | 5.51e-01 | 95.3% | 71.3% |
| 4206524 | 605.2.1.3 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Seryl_tRNA_N | 0.70 | 47.0 | 4.38e-01 | 95.3% | 54.5% |
| 5060314 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.70 | 49.0 | 4.82e-01 | 82.6% | 68.9% |
| 4343661 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.69 | 36.0 | 3.26e-01 | 77.9% | 38.6% |
| 5068095 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.68 | 43.0 | 4.27e-01 | 75.6% | 61.1% |
| 3754639 | 150.5.1.106 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › LIN9_C | 0.67 | 46.0 | 4.67e-01 | 94.2% | 71.8% |
| 4209030 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.67 | 35.0 | 3.20e-01 | 77.9% | 38.6% |
| 3958582 | 101.1.1.282 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF222 | 0.65 | 56.0 | 4.63e-01 | 98.8% | 53.3% |
| 3477418 | 4992.1.1.12 ↗ | extended segments › RelB-like › RelB-like › RelB-like › LIN9_C | 0.65 | 46.0 | 4.48e-01 | 91.9% | 66.3% |
| 2485668 | 7025.1.1.2 ↗ | alpha bundles › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9_C | 0.63 | 45.0 | 4.56e-01 | 91.9% | 76.2% |
| 4973614 | 5069.1.3.26 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › DUF1622 | 0.62 | 50.0 | 4.65e-01 | 88.4% | 92.7% |
| 3880637 | 3755.3.1.465 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A | 0.58 | 47.0 | 3.99e-01 | 87.2% | 75.0% |
| 3749996 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.54 | 37.0 | 3.38e-01 | 72.1% | 65.6% |
| 5020701 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.54 | 47.0 | 3.40e-01 | 95.3% | 88.1% |