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qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00604
Bact-Virqs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00604
Identity
- Kingdom:
- phage
Quality
82.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-73
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wjsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 50.0 | 4.16e-01 | 98.5% | 65.4% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 50.0 | 4.51e-01 | 98.5% | 78.1% |
| 1vjfA00 | 3.90.960.10 | Alpha Beta › Alpha-Beta Complex › YbaK protein › YbaK/aminoacyl-tRNA synthetase-associated domain | 0.55 | 44.0 | 3.50e-01 | 100.0% | 50.0% |
| 1wp5A00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.51 | 41.0 | 2.77e-01 | 95.4% | 26.4% |
| 3rnvA00 | 3.90.70.150 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Helper component proteinase | 0.51 | 39.0 | 3.32e-01 | 89.2% | 87.8% |
| 2r31A01 | 3.30.2180.10 | Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like | 0.50 | 35.0 | 3.49e-01 | 98.5% | 72.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3751388 | 389.1.1.49 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_Teneurin | 0.63 | 33.0 | 3.83e-01 | 100.0% | 71.1% |
| 3367958 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 53.0 | 4.44e-01 | 98.5% | 70.4% |
| 4932189 | 4076.2.1.6 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › DUF1922 | 0.60 | 44.0 | 4.36e-01 | 80.0% | 94.3% |
| 3592207 | 299.1.1.1 ↗ | a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain › tRNA_edit | 0.59 | 50.0 | 3.87e-01 | 100.0% | 51.5% |
| 3480659 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.58 | 49.0 | 3.79e-01 | 98.5% | 62.6% |
| 4064585 | 2003.2.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 | 0.52 | 38.0 | 2.44e-01 | 84.6% | 36.6% |
| 3853030 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.51 | 40.0 | 2.99e-01 | 86.2% | 60.6% |
| 3718703 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 39.0 | 3.52e-01 | 90.8% | 95.0% |