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qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00677

Bact-Vir

qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00677

Identity

Kingdom:
phage

Quality

69.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-74
PDB
Domain cluster: representative
CATH (96)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.72 65.0 4.64e-01 100.0% 39.8%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.71 61.0 5.16e-01 97.0% 61.4%
2rrnA01 3.30.70.2040 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 57.0 5.31e-01 88.1% 75.9%
2dchX01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.70 59.0 5.31e-01 92.5% 67.7%
3m05B01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 56.0 5.08e-01 88.1% 68.5%
2ab5B01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.70 58.0 4.76e-01 94.0% 62.5%
2k3iA01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 57.0 5.33e-01 92.5% 90.6%
6x4tA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 60.0 5.59e-01 97.0% 100.0%
4of8A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 61.0 5.31e-01 98.5% 92.2%
3lnlB02 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 56.0 5.16e-01 89.6% 76.1%
3evzA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 52.0 3.85e-01 80.6% 86.7%
2joqA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.69 54.0 5.26e-01 86.6% 82.7%
2vs7A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.69 58.0 5.54e-01 94.0% 83.3%
7qssA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.68 55.0 4.04e-01 89.6% 82.4%
4ushA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 57.0 4.96e-01 94.0% 68.9%
8ediA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 59.0 5.15e-01 100.0% 89.4%
5suhB01 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.67 59.0 5.23e-01 100.0% 87.9%
4qjvB00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.67 57.0 5.21e-01 100.0% 78.7%
3by8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.67 52.0 4.17e-01 85.1% 69.9%
3mtjA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 50.0 4.83e-01 86.6% 72.4%
2dt9A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 51.0 4.90e-01 86.6% 79.7%
1u8sA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 52.0 4.88e-01 88.1% 76.2%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 52.0 4.92e-01 91.0% 72.9%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.65 58.0 5.46e-01 100.0% 90.2%
1vloA01 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.65 56.0 4.49e-01 100.0% 56.4%
3n79A01 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.64 51.0 4.86e-01 88.1% 74.4%
2ogkD00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.64 53.0 4.19e-01 92.5% 75.4%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 50.0 4.62e-01 88.1% 70.0%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.64 49.0 4.16e-01 82.1% 54.1%
3b82A06 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 48.0 4.10e-01 88.1% 47.1%
3n0vA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 49.0 4.65e-01 86.6% 77.4%
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.63 49.0 4.84e-01 83.6% 95.9%
4ctaA02 3.30.70.2860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 51.0 4.91e-01 88.1% 82.7%
2yweA04 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 48.0 4.13e-01 88.1% 50.0%
1u8sA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 49.0 4.57e-01 86.6% 70.9%
2ca9A02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.63 50.0 4.62e-01 88.1% 70.8%
2dbbA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.63 50.0 4.52e-01 88.1% 68.8%
1omsA00 3.30.70.1050 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain 0.63 51.0 4.28e-01 89.6% 98.2%
3c19A01 3.30.70.1380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transcriptional regulatory protein pf0864 domain like 0.62 51.0 4.51e-01 91.0% 71.7%
2ednA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 53.0 4.47e-01 98.5% 80.5%
2mq8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.62 49.0 4.18e-01 88.1% 67.9%
2jgtA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.61 52.0 4.20e-01 98.5% 56.0%
3nrbB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 47.0 4.45e-01 86.6% 75.9%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 49.0 4.72e-01 91.0% 81.0%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.61 49.0 4.76e-01 89.6% 90.7%
6lpnA04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 50.0 4.52e-01 92.5% 70.5%
1j4wA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.61 49.0 4.75e-01 89.6% 89.2%
3tviA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.61 51.0 4.01e-01 100.0% 93.1%
2wnyA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.61 49.0 3.96e-01 91.0% 73.7%
1uw4A00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.61 49.0 4.51e-01 91.0% 71.4%
2go8A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 48.0 4.70e-01 88.1% 82.4%
2lu1A00 3.30.70.2370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 47.0 4.39e-01 88.1% 84.3%
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.61 45.0 4.18e-01 80.6% 70.1%
3so6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 42.0 3.34e-01 71.6% 74.5%
3gjuA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.61 52.0 3.50e-01 100.0% 84.9%
3pm9A04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 47.0 4.41e-01 88.1% 85.1%
2yweA03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.60 47.0 4.44e-01 88.1% 76.8%
5flmA02 3.30.1360.140 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.60 50.0 4.12e-01 100.0% 86.8%
2a2cA02 3.30.70.3170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 49.0 4.58e-01 92.5% 83.3%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 46.0 4.11e-01 88.1% 67.0%
3k59A02 3.30.70.2250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › B family DNA polymerase, N domain, alpha/beta motif 0.59 47.0 4.73e-01 88.1% 89.6%
4dzrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 43.0 3.33e-01 79.1% 89.6%
2x3gA00 3.30.70.1910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 47.0 4.00e-01 88.1% 56.9%
4dpoB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 46.0 4.10e-01 88.1% 73.3%
1o5wA02 3.90.660.10 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › 0.59 52.0 3.49e-01 100.0% 80.8%
2if1A00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.59 51.0 4.22e-01 100.0% 53.2%
1o5wB02 3.90.660.10 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › 0.59 52.0 3.87e-01 100.0% 70.7%
5vnxA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.59 50.0 4.09e-01 100.0% 57.8%
1fc4A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.59 49.0 4.00e-01 98.5% 53.7%
1iujA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 45.0 4.04e-01 88.1% 73.5%
3im9A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.58 45.0 4.45e-01 91.0% 79.7%
3a2bA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 49.0 4.01e-01 98.5% 55.3%
2pgcC01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 44.0 4.04e-01 88.1% 79.4%
3popA02 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.58 45.0 3.16e-01 89.6% 34.9%
1uirA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 50.0 3.43e-01 98.5% 90.5%
1q2lA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.58 49.0 3.47e-01 100.0% 42.4%
4lecA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 43.0 3.18e-01 83.6% 81.2%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 3.61e-01 82.1% 51.7%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 47.0 4.01e-01 95.5% 70.4%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 4.11e-01 89.6% 83.1%
3go9A02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.56 45.0 3.30e-01 95.5% 44.2%
1x60A01 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.56 43.0 4.29e-01 88.1% 87.5%
2fphX01 3.30.1370.160 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.56 40.0 3.89e-01 77.6% 70.1%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 43.0 3.62e-01 86.6% 65.0%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 43.0 3.85e-01 89.6% 68.9%
1t0tV02 3.30.70.1030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 0.55 42.0 3.69e-01 88.1% 70.3%
2qkpD00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 39.0 3.25e-01 79.1% 80.6%
2lfvA00 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.54 42.0 3.70e-01 88.1% 63.2%
2wmfA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.54 47.0 3.90e-01 100.0% 67.5%
3hrgA01 3.30.420.250 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, N-terminal domain 0.54 39.0 3.10e-01 77.6% 76.9%
2m38A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 3.64e-01 95.5% 68.9%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.83e-01 91.0% 78.1%
3d8dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 44.0 3.55e-01 95.5% 73.4%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.75e-01 92.5% 75.7%
1vdhA01 3.30.70.1030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 0.53 40.0 3.51e-01 91.0% 66.9%
4dzdA01 3.30.70.1200 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 0.51 39.0 3.89e-01 86.6% 81.4%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4993816 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.79 65.0 4.93e-01 89.6% 39.3%
5037293 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.78 62.0 6.11e-01 89.6% 81.4%
4669669 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.77 66.0 5.57e-01 94.0% 60.0%
5046395 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 57.0 5.46e-01 80.6% 69.3%
3603294 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.76 64.0 5.77e-01 91.0% 75.6%
3602142 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.76 63.0 5.46e-01 92.5% 67.6%
4113237 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.75 62.0 5.55e-01 91.0% 66.3%
4999898 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.74 63.0 5.71e-01 92.5% 77.8%
3178011 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.74 63.0 4.96e-01 94.0% 55.0%
4993809 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.73 63.0 5.44e-01 92.5% 64.0%
4943245 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.73 62.0 4.92e-01 92.5% 48.5%
3602264 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.73 60.0 5.52e-01 91.0% 70.6%
172962 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.72 66.0 5.61e-01 100.0% 70.8%
4654074 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.72 58.0 5.28e-01 88.1% 65.6%
4464001 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.71 61.0 5.05e-01 94.0% 63.5%
4043865 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.71 57.0 5.28e-01 88.1% 74.1%
4992480 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.70 59.0 5.38e-01 92.5% 70.0%
1159603 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.70 59.0 5.58e-01 92.5% 77.8%
3375878 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.69 55.0 5.30e-01 88.1% 77.3%
5023057 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.69 58.0 5.59e-01 92.5% 82.7%
4997605 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.69 58.0 5.05e-01 92.5% 63.0%
3941084 11.1.1.847 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Unc5_NetrinR_N 0.69 61.0 5.03e-01 98.5% 85.8%
5029853 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.69 57.0 4.74e-01 92.5% 52.5%
3603763 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.69 57.0 5.20e-01 92.5% 71.1%
4930552 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.68 54.0 5.14e-01 88.1% 82.5%
3739337 2003.1.5.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ 0.68 55.0 3.73e-01 89.6% 28.6%
3178012 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.68 59.0 5.07e-01 97.0% 64.8%
4583844 327.16.1.7 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Rhomboid_N 0.67 53.0 5.42e-01 88.1% 89.2%
4027187 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.67 51.0 4.55e-01 88.1% 56.0%
5033257 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.67 56.0 5.43e-01 92.5% 88.0%
4475558 304.5.1.5 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › HisG_C 0.67 52.0 5.10e-01 88.1% 78.4%
4997777 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.67 57.0 5.33e-01 97.0% 80.0%
5057051 304.130.1.0 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain 0.67 53.0 5.18e-01 91.0% 78.7%
5066425 304.5.1.7 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.67 52.0 4.98e-01 89.6% 72.5%
3969285 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.67 52.0 4.82e-01 85.1% 77.6%
5023543 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.67 56.0 4.88e-01 92.5% 62.0%
3739841 304.39.1.1 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.67 54.0 4.59e-01 91.0% 73.9%
5057455 305.1.1.0 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.67 58.0 5.52e-01 100.0% 83.7%
1211842 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.67 57.0 5.12e-01 97.0% 74.0%
4963299 304.24.1.43 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › PF25930 0.66 56.0 4.67e-01 100.0% 52.8%
5010185 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.66 55.0 5.41e-01 88.1% 95.7%
4220147 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.66 55.0 5.14e-01 94.0% 74.1%
4039974 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 55.0 4.69e-01 95.5% 60.0%
3464795 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.66 52.0 4.36e-01 88.1% 55.0%
5043329 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.66 55.0 5.07e-01 92.5% 76.5%
4996402 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.65 54.0 4.81e-01 91.0% 67.4%
4971295 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.65 56.0 5.07e-01 98.5% 74.7%
3969151 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.65 51.0 4.85e-01 86.6% 85.0%
3285516 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.65 51.0 4.81e-01 88.1% 75.3%
4935067 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.65 54.0 5.07e-01 94.0% 74.1%
4937181 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.65 57.0 5.41e-01 100.0% 83.7%
146984 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.65 56.0 3.81e-01 100.0% 44.8%
5054002 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.64 56.0 5.32e-01 100.0% 83.7%
3999247 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.64 47.0 4.93e-01 88.1% 91.7%
4196765 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 51.0 5.06e-01 89.6% 90.0%
5048300 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 51.0 4.44e-01 88.1% 56.2%
3950275 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.64 54.0 5.03e-01 97.0% 82.4%
4217144 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.64 51.0 4.84e-01 88.1% 86.3%
4991797 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.64 48.0 4.62e-01 88.1% 71.2%
4316605 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.63 54.0 3.70e-01 100.0% 47.7%
3716197 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.63 49.0 4.41e-01 88.1% 76.0%
4952784 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.63 53.0 4.83e-01 94.0% 71.1%
5052199 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.63 52.0 3.69e-01 91.0% 80.5%
4595919 305.1.1.1 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.63 54.0 4.97e-01 100.0% 79.8%
4014672 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.62 53.0 4.18e-01 98.5% 52.0%
4932197 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.62 49.0 4.88e-01 91.0% 84.3%
4982458 304.162.1.2 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M 0.62 49.0 4.92e-01 88.1% 85.7%
3525146 3450.1.1.0 alpha arrays › Myosin-binding motif (m-domain) C-terminal subdomain › Myosin-binding motif (m-domain) C-terminal subdomain › Myosin-binding motif (m-domain) C-terminal subdomain 0.61 52.0 3.34e-01 100.0% 21.4%
5023724 2.1.1.95 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Lig_C 0.61 44.0 3.63e-01 79.1% 85.2%
3596489 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.61 51.0 4.30e-01 98.5% 59.2%
3974161 304.13.1.1 a+b two layers › Alpha-beta plaits › Hypothetical protein VC0424 › Hypothetical protein VC0424 › RraB 0.61 53.0 4.47e-01 97.0% 69.0%
3206066 327.19.1.0 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain 0.61 49.0 4.25e-01 91.0% 64.5%
3730022 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.61 50.0 4.41e-01 92.5% 67.0%
4975490 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.61 46.0 4.76e-01 86.6% 98.3%
3403703 304.110.1.0 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like 0.60 47.0 4.14e-01 88.1% 61.0%
4614439 304.117.1.1 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg 0.60 47.0 4.53e-01 89.6% 82.5%
3285548 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.60 50.0 4.45e-01 98.5% 70.5%
4129075 327.19.1.1 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.60 49.0 4.55e-01 91.0% 75.3%
3519958 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.60 47.0 4.70e-01 88.1% 97.1%
3407891 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.59 50.0 4.45e-01 100.0% 72.8%
4592125 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.59 49.0 4.37e-01 98.5% 73.3%
3411905 327.11.2.20 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › BICC1_KH 0.59 48.0 4.88e-01 86.6% 92.3%
4406280 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.59 49.0 4.26e-01 98.5% 65.5%
3170501 327.19.1.0 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain 0.59 46.0 4.25e-01 88.1% 74.4%
3604277 327.11.2.82 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF27275 0.58 44.0 4.32e-01 89.6% 76.0%
3349170 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.58 45.0 4.56e-01 88.1% 84.6%
3740868 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.57 45.0 4.38e-01 92.5% 86.3%
None 0.57 43.0 3.08e-01 85.1% 78.7%
4228937 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.57 48.0 4.32e-01 97.0% 78.9%
3741856 220.1.1.4 beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.56 41.0 3.30e-01 77.6% 77.0%
5025840 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 44.0 3.92e-01 89.6% 79.0%
3628325 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.54 41.0 4.22e-01 89.6% 95.4%
3686581 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.54 46.0 4.47e-01 92.5% 86.7%
3329735 327.11.2.37 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DEAH11_1st 0.54 41.0 4.11e-01 88.1% 90.0%
4885808 7577.1.1.1 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 0.54 45.0 4.46e-01 98.5% 98.6%
1788098 2.1.1.95 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Lig_C 0.54 39.0 3.20e-01 79.1% 79.1%
2512800 304.4.1.9 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Chlor_dismutase 0.54 41.0 3.43e-01 89.6% 58.4%
4264245 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.54 43.0 3.96e-01 89.6% 73.3%
3701433 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 39.0 3.27e-01 83.6% 79.2%
271678 304.4.1.9 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Chlor_dismutase 0.51 39.0 3.26e-01 89.6% 60.9%