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regulatory_protein_ICP22

Euk-Vir

Ateline_alphaherpesvirus_1

regulatory_protein_ICP22__YP_009361949__Ateline_alphaherpesvirus_1__35243

Identity

Accession:
YP_009361949 ↗
Protein ID:
regulatory_protein_ICP22
Kingdom:
euk

Quality

51.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 70-144
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02479.22 best Herpes_IE68 59.8 3.00e-16 100.0% 55.2%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w53A00 1.10.1240.30 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain 0.60 45.0 4.36e-01 81.3% 78.6%
1ic8A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.53 37.0 3.54e-01 74.7% 71.3%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
314734 4982.1.1.2 alpha arrays › KaiA/RbsU domain-like › KaiA/RbsU domain › KaiA/RbsU domain › RsbU_N 0.60 45.0 4.33e-01 81.3% 76.7%
3488339 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.59 41.0 4.00e-01 73.3% 89.4%
4940572 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.55 48.0 3.70e-01 100.0% 49.1%
3489734 197.1.1.0 alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like 0.52 36.0 3.60e-01 74.7% 68.8%