←Back to structures
regulatory_protein_IE2
Euk-VirAotine_betaherpesvirus_1
regulatory_protein_IE2__YP_004940130__Aotine_betaherpesvirus_1__50290
Identity
- Accession:
- YP_004940130 ↗
- Protein ID:
- regulatory_protein_IE2
- Kingdom:
- euk
Quality
55.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Aotine_betaherpesvirus_1
TaxID: 50290
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 403-485_519-583
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03361.21 best | Herpes_IE2_3 | 77.1 | 1.70e-21 | 46.0% | 41.4% |
| PF03361.21 | Herpes_IE2_3 | 82.7 | 3.00e-23 | 42.6% | 38.9% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.71 | 51.0 | 4.88e-01 | 76.4% | 65.3% |
| 2kjwA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.70 | 42.0 | 5.10e-01 | 72.3% | 91.7% |
| 5d4nC00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 44.0 | 5.26e-01 | 70.9% | 96.9% |
| 2cz4A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 44.0 | 5.22e-01 | 70.9% | 98.0% |
| 4rx6D00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 46.0 | 5.29e-01 | 73.0% | 98.1% |
| 2mdaA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 42.0 | 5.01e-01 | 70.9% | 100.0% |
| 6gdxA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 44.0 | 5.05e-01 | 71.6% | 95.3% |
| 1xmbA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 43.0 | 5.15e-01 | 74.3% | 100.0% |
| 3ahpA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 45.0 | 5.19e-01 | 75.0% | 100.0% |
| 1p1lA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 43.0 | 5.09e-01 | 73.6% | 100.0% |
| 4y6iA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 43.0 | 5.08e-01 | 71.6% | 99.0% |
| 4iyqA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 44.0 | 5.06e-01 | 73.0% | 97.2% |
| 2nuhA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 43.0 | 5.04e-01 | 73.6% | 100.0% |
| 1j2vA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 42.0 | 4.97e-01 | 70.9% | 100.0% |
| 4e98C00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 43.0 | 5.00e-01 | 73.6% | 100.0% |
| 2zomA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 43.0 | 4.90e-01 | 73.6% | 97.2% |
| 1nxiA00 | 3.30.70.970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RraB-like | 0.61 | 48.0 | 5.01e-01 | 83.1% | 91.7% |
| 5huoE01 | 3.90.1170.20 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Quinolinate phosphoribosyl transferase, N-terminal domain | 0.60 | 41.0 | 4.30e-01 | 70.3% | 83.5% |
| 4pxeA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 41.0 | 4.57e-01 | 74.3% | 100.0% |
| 2fpnA01 | 3.30.2030.10 | Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like | 0.57 | 40.0 | 4.18e-01 | 72.3% | 95.7% |
| 2v8hA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 39.0 | 4.37e-01 | 70.9% | 100.0% |
| 4er8A00 | 3.30.70.1290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like | 0.56 | 41.0 | 3.97e-01 | 78.4% | 66.7% |
| 4noiA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.55 | 36.0 | 4.08e-01 | 70.9% | 93.2% |
| 4mmoA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 37.0 | 3.63e-01 | 70.3% | 100.0% |
| 1bdfA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.52 | 34.0 | 3.84e-01 | 70.3% | 89.6% |
| 1aamA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 40.0 | 3.29e-01 | 81.8% | 90.0% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2324003 | 304.15.1.3 ↗ | a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain › Herpes_IE2_3 | 0.95 | 78.0 | 7.48e-01 | 83.8% | 95.8% |
| 5202 | 304.5.1.1 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › P-II | 0.67 | 44.0 | 5.20e-01 | 70.9% | 97.0% |
| 5037829 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.67 | 45.0 | 5.31e-01 | 73.0% | 100.0% |
| 5023983 | 304.130.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion | 0.67 | 42.0 | 5.04e-01 | 70.3% | 94.0% |
| 5038160 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.67 | 45.0 | 5.28e-01 | 71.6% | 100.0% |
| 5040667 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.66 | 45.0 | 5.23e-01 | 71.6% | 99.0% |
| 4629521 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.66 | 45.0 | 5.24e-01 | 73.0% | 99.0% |
| 5000967 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.66 | 45.0 | 5.22e-01 | 72.3% | 98.1% |
| 5060406 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.65 | 44.0 | 4.99e-01 | 73.0% | 91.8% |
| 5027749 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.65 | 43.0 | 5.13e-01 | 73.0% | 100.0% |
| 4932235 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.65 | 43.0 | 5.03e-01 | 71.6% | 96.2% |
| 4940122 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.65 | 43.0 | 5.08e-01 | 72.3% | 100.0% |
| 5078601 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.64 | 45.0 | 5.12e-01 | 75.0% | 97.2% |
| 4944847 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.64 | 44.0 | 5.14e-01 | 74.3% | 100.0% |
| 409322 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.64 | 45.0 | 5.20e-01 | 77.0% | 100.0% |
| 4957224 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.64 | 43.0 | 5.05e-01 | 71.6% | 100.0% |
| 149356 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.64 | 44.0 | 4.95e-01 | 73.0% | 92.7% |
| 5015958 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.64 | 44.0 | 5.11e-01 | 74.3% | 100.0% |
| 3583468 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.64 | 44.0 | 4.99e-01 | 73.0% | 94.5% |
| 4140821 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.64 | 44.0 | 5.08e-01 | 73.6% | 99.0% |
| 402134 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.63 | 44.0 | 4.81e-01 | 73.6% | 87.3% |
| 222842 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.63 | 44.0 | 5.08e-01 | 73.6% | 99.1% |
| 3214238 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.63 | 44.0 | 5.04e-01 | 74.3% | 99.0% |
| 163096 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.63 | 43.0 | 5.04e-01 | 73.6% | 100.0% |
| 5047879 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.63 | 43.0 | 5.02e-01 | 73.6% | 99.0% |
| 4941725 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.63 | 42.0 | 4.95e-01 | 70.3% | 100.0% |
| 3459357 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.62 | 43.0 | 4.81e-01 | 73.6% | 91.3% |
| 3177336 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.62 | 43.0 | 4.95e-01 | 76.4% | 99.0% |
| 2167751 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.62 | 43.0 | 4.72e-01 | 70.3% | 100.0% |
| 3898132 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.62 | 43.0 | 4.49e-01 | 74.3% | 75.7% |
| 4961676 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.60 | 41.0 | 4.56e-01 | 70.9% | 100.0% |
| 1780607 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.58 | 42.0 | 4.68e-01 | 74.3% | 100.0% |
| 4986421 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.55 | 38.0 | 4.40e-01 | 72.3% | 98.1% |
| 3285136 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.55 | 39.0 | 3.87e-01 | 74.3% | 100.0% |
| 2798195 | 304.45.1.1 ↗ | a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK | 0.55 | 40.0 | 3.84e-01 | 75.0% | 80.0% |
| 5043215 | 304.8.1.82 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF27325 | 0.51 | 35.0 | 3.77e-01 | 83.1% | 81.5% |