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regulatory_protein
Euk-VirHuman_papillomavirus_140
regulatory_protein__YP_006393305__Human_papillomavirus_140__1070413
Identity
- Accession:
- YP_006393305 ↗
- Protein ID:
- regulatory_protein
- Kingdom:
- euk
Quality
81.1
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Gammapapillomavirus›
Human_papillomavirus_140
TaxID: 1070413
Cluster
View cluster (48 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 300-391
Domain cluster:
rep: E2__YP_009272701__Sparus_aurata_papillomavirus_1__1885928__D227-298
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00511.23 best | PPV_E2_C | 83.6 | 1.20e-23 | 84.8% | 98.8% |
D2
medium
residues 3-103
Domain cluster:
rep: E2_regulatory_protein__YP_002308360__Caretta_caretta_papillomavirus_1__485241__D3-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00508.23 best | PPV_E2_N | 129.0 | 2.20e-37 | 100.0% | 49.5% |
D3
medium
residues 106-197
Domain cluster:
rep: E2__YP_009252394__Cervus_papillomavirus_2__1434070__D104-195
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00508.23 best | PPV_E2_N | 112.2 | 3.10e-32 | 100.0% | 45.0% |