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rep_protein
Euk-VirWatermelon_chlorotic_stunt_virus
rep_protein__NP_620297__Watermelon_chlorotic_stunt_virus__35341
Identity
- Accession:
- NP_620297 ↗
- Protein ID:
- rep_protein
- Kingdom:
- euk
Quality
81.4
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Begomovirus›
Watermelon_chlorotic_stunt_virus
TaxID: 35341
Cluster
View cluster (491 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-113
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 165.0 | 7.80e-49 | 100.0% | 93.8% |
D2
high
residues 130-172
Domain cluster:
rep: replication_initiator_protein__YP_009241413__Deinbollia_mosaic_virus__1812308__D128-173
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 39.5 | 7.30e-10 | 100.0% | 41.1% |
D3
high
residues 185-356
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 44.3 | 2.30e-11 | 26.2% | 42.1% |