←Back to structures
rep_protein
Euk-VirTomato_yellow_leaf_curl_Vietnam_virus
rep_protein__YP_001285746__Tomato_yellow_leaf_curl_Vietnam_virus__390442
Identity
- Accession:
- YP_001285746 ↗
- Protein ID:
- rep_protein
- Kingdom:
- euk
Quality
80.6
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Begomovirus›
Tomato_yellow_leaf_curl_Vietnam_virus
TaxID: 390442
Cluster
View cluster (491 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-114
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 201.8 | 2.90e-60 | 100.0% | 92.9% |
D2
high
residues 188-336
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 45.9 | 7.50e-12 | 28.9% | 41.1% |
D3
medium
residues 124-187
Domain cluster:
rep: replication_initiator_protein__YP_009241413__Deinbollia_mosaic_virus__1812308__D128-173
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 61.2 | 1.20e-16 | 96.9% | 57.9% |