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rep_protein
Euk-VirBat_adeno-associated_virus_YNM
rep_protein__YP_003858571__Bat_adeno-associated_virus_YNM__727962
Identity
- Accession:
- YP_003858571 ↗
- Protein ID:
- rep_protein
- Kingdom:
- euk
Quality
82.4
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Dependoparvovirus›
Bat_adeno-associated_virus_YNM
TaxID: 727962
Cluster
View cluster (29 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-198
Domain cluster:
rep: NS1__YP_009507375__Chipmunk_parvovirus__56820__D1-203
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08724.17 best | Rep_N | 160.7 | 4.90e-47 | 94.9% | 98.9% |
D2
high
residues 303-474
Domain cluster:
rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01057.24 best | Parvo_NS1 | 291.2 | 8.20e-87 | 100.0% | 62.7% |
| PF00519.24 | PPV_E1_C | 28.8 | 9.90e-07 | 96.5% | 51.6% |
D3
medium
residues 212-270
Domain cluster:
rep: Rep_68_protein__YP_680422__adeno-associated_virus_2__10804__D219-282
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01057.24 best | Parvo_NS1 | 51.5 | 1.00e-13 | 100.0% | 21.4% |