repeat_element_protein-b4.1

Euk-Vir

Ichnoviriform_fugitivi

repeat_element_protein-b4.1__YP_001031251__Ichnoviriform_fugitivi__265522

Identity

67.5 mean pLDDT

View cluster (27 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 48-173

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12132.14 best	DUF3587	78.1	9.30e-22	98.4%	60.7%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2n1rA00	1.10.150.90	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17	0.59	41.0	4.02e-01	96.8%	66.4%
2h1eA02	2.40.50.40	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.53	24.0	3.32e-01	83.3%	90.9%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4030506	108.1.1.0 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand	0.53	34.0	3.83e-01	80.2%	86.3%
3268570	178.1.1.1 ↗	alpha arrays › SWIB/MDM2 domain › SWIB/MDM2 domain › SWIB/MDM2 domain › SWIB	0.52	40.0	4.32e-01	80.2%	98.1%
3813290	2484.1.1.198 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371	0.50	43.0	3.08e-01	100.0%	30.4%