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repeat_element_protein-c18.3
Euk-VirIchnoviriform_fugitivi
repeat_element_protein-c18.3__YP_001031298__Ichnoviriform_fugitivi__265522
Identity
- Accession:
- YP_001031298 ↗
- Protein ID:
- repeat_element_protein-c18.3
- Kingdom:
- euk
Quality
70.5
mean pLDDT
Cluster
View cluster (27 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 64-146_158-213
D2
medium
residues 14-63
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12132.14 best | DUF3587 | 48.0 | 1.50e-12 | 100.0% | 23.4% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7lhsB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.70 | 58.0 | 3.90e-01 | 96.0% | 83.9% |
| 1np7A02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 52.0 | 4.03e-01 | 96.0% | 58.0% |
| 4dccA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 43.0 | 3.88e-01 | 82.0% | 67.6% |
| 4u7bA01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.57 | 45.0 | 4.50e-01 | 94.0% | 94.1% |
| 4etsA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 43.0 | 3.62e-01 | 84.0% | 48.3% |
| 1n00A03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.56 | 43.0 | 4.00e-01 | 94.0% | 90.4% |
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 41.0 | 4.19e-01 | 84.0% | 84.0% |
| 1k78I00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 37.0 | 3.65e-01 | 82.0% | 75.9% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3266370 | 2007.2.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase2 | 0.63 | 48.0 | 3.48e-01 | 92.0% | 82.9% |
| 3582795 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.59 | 46.0 | 4.43e-01 | 92.0% | 96.7% |
| 4290005 | 3949.1.1.0 ↗ | alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain | 0.55 | 38.0 | 3.72e-01 | 74.0% | 63.6% |
| 4678981 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 43.0 | 4.32e-01 | 80.0% | 82.0% |
| 3699551 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 39.0 | 3.44e-01 | 78.0% | 96.2% |
| 1227109 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.55 | 43.0 | 2.75e-01 | 88.0% | 19.9% |
| 3789626 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 36.0 | 3.50e-01 | 82.0% | 67.7% |