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repeat_element_protein-c5.1
Euk-VirIchnoviriform_fugitivi
repeat_element_protein-c5.1__YP_001031277__Ichnoviriform_fugitivi__265522
Identity
- Accession:
- YP_001031277 ↗
- Protein ID:
- repeat_element_protein-c5.1
- Kingdom:
- euk
Quality
80.0
mean pLDDT
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 49-153
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12132.14 best | DUF3587 | 135.9 | 1.90e-39 | 100.0% | 54.2% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jv2B04 | 4.10.1240.30 | Few Secondary Structures › Irregular › Hormone receptor fold › | 0.56 | 24.0 | 2.61e-01 | 90.5% | 45.3% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3524747 | 827.1.1.1 ↗ | a+b two layers › Integrin beta tail domain › Integrin beta tail domain › Integrin beta tail domain › Integrin_B_tail | 0.62 | 25.0 | 2.82e-01 | 95.2% | 45.0% |
| 3913220 | 7579.1.1.4 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9,BD-FAE | 0.51 | 41.0 | 3.19e-01 | 90.5% | 92.5% |
D2
medium
residues 154-232
Domain cluster:
rep: repeat_element_protein-d2.1__YP_001031304__Ichnoviriform_fugitivi__265522__D150-216