replicase

Euk-Vir

Pea_enation_mosaic_virus_2

replicase__NP_620846__Pea_enation_mosaic_virus_2__193120

Identity

76.8 mean pLDDT

View cluster (58 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-66

PDB

Domain cluster: rep: hypothetical_protein_1__YP_009337296__Changjiang_tombus-like_virus_3__1922817__D1-56

D2 medium residues 228-299

PDB

Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_002302259__Carrot_mottle_virus__68033__D254-317

D3 medium residues 300-380

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	30.9	1.70e-07	69.1%	10.5%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3uepA00	2.30.330.10	Mainly Beta › Roll › Surface presentation of antigens (SPOA) › SpoA-like	0.51	30.0	3.03e-01	95.1%	54.1%

D4 medium residues 394-493_528-599

PDB

Domain cluster: rep: hypothetical_protein_1__YP_009336562__Hubei_tombus-like_virus_9__1923296__D77-195_233-294

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	102.4	3.70e-29	58.1%	19.8%
PF00998.29	RdRP_3	93.2	2.30e-26	41.9%	14.8%

D5 medium residues 494-527_600-699

PDB

Domain cluster: rep: hypothetical_protein_1__YP_009337274__Changjiang_tombus-like_virus_14__1922807__D158-196_253-344

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	109.4	2.90e-31	74.6%	20.2%
PF00998.29	RdRP_3	30.3	2.60e-07	26.1%	7.0%