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replicase

Euk-Vir

Blackberry_chlorotic_ringspot_virus

replicase__YP_002308569__Blackberry_chlorotic_ringspot_virus__339420

Identity

Accession:
YP_002308569 ↗
Protein ID:
replicase
Kingdom:
euk

Quality

72.3 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Bromoviridae› Ilarvirus› Blackberry_chlorotic_ringspot_virus

TaxID: 339420

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 672-782
PDB
Domain cluster: rep: replication-associated_polyprotein_1a__YP_009165996__Privet_ringspot_virus__2169960__D691-782
D2 high residues 796-933
PDB
Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01443.25 best Viral_helicase1 90.6 1.90e-25 94.2% 51.3%
D3 high residues 938-1086
PDB
Domain cluster: rep: methyltransferase-helicase__YP_009551567__Tea_plant_line_pattern_virus__2419940__D883-1037
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01443.25 best Viral_helicase1 48.7 1.30e-12 81.9% 46.1%
D4 medium residues 19-53
PDB
D5 medium residues 91-225_284-337
PDB
Domain cluster: rep: methyltransferase_helicase__YP_009104367__Lilac_leaf_chlorosis_virus__722755__D97-204_268-298
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF01660.23 best Vmethyltransf 104.1 1.10e-29 77.8% 43.7%
PF19223.6 Chropara_Vmeth 24.8 1.50e-05 63.5% 27.0%
D6 medium residues 226-283
PDB
Domain cluster: rep: 1a_protein__NP_049331__Peanut_stunt_virus__12313__D212-238_254-285
D7 medium residues 338-447
PDB