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replicase
Euk-VirFragaria_chiloensis_latent_virus
replicase__YP_164801__Fragaria_chiloensis_latent_virus__255238
Identity
- Accession:
- YP_164801 ↗
- Protein ID:
- replicase
- Kingdom:
- euk
Quality
72.2
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Martellivirales›
Bromoviridae›
Ilarvirus›
Fragaria_chiloensis_latent_virus
TaxID: 255238
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 794-913
Domain cluster:
rep: KX578043.1__AOT27930.1__X__00015__D87-267
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01443.25 best | Viral_helicase1 | 60.7 | 2.60e-16 | 99.2% | 43.9% |
D2
high
residues 921-1071
Domain cluster:
rep: methyltransferase-helicase__YP_009551567__Tea_plant_line_pattern_virus__2419940__D883-1037
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01443.25 best | Viral_helicase1 | 46.7 | 5.00e-12 | 80.1% | 39.9% |
D3
medium
residues 17-52
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ljkA03 | 1.10.1390.10 | Mainly Alpha › Orthogonal Bundle › Phosphoglucose isomerase, C-terminal domain › | 0.59 | 44.0 | 4.36e-01 | 86.1% | 97.4% |
D4
medium
residues 94-302
Domain cluster:
rep: uncovered_polypeptide_polyprotein__YP_001086452_0-758__Chrysanthemum_virus_B__12165__D72-292
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01660.23 best | Vmethyltransf | 159.3 | 1.70e-46 | 100.0% | 66.6% |
D5
medium
residues 313-441_532-558
D6
medium
residues 637-684_774-793
Domain cluster:
representative
D7
medium
residues 685-773