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replication-associated_protein
Euk-VirDragonfly-associated_microphage_1_Viruses.
replication-associated_protein__YP_006908225__Dragonfly-associated_microphage_1_Viruses.__X
Identity
- Accession:
- YP_006908225 ↗
- Protein ID:
- replication-associated_protein
- Kingdom:
- euk
Quality
81.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 42-159
Domain cluster:
rep: NC_055055.1__YP_010084014.1__KMD55_gp11__00011__D125-284
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23343.3 best | REP_ORF2-G2P | 88.7 | 3.60e-25 | 82.2% | 100.0% |
CATH (78)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x3gA00 | 3.30.70.1910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.74 | 59.0 | 5.98e-01 | 83.9% | 87.1% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.74 | 50.0 | 5.86e-01 | 73.7% | 100.0% |
| 3luyA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.73 | 50.0 | 5.65e-01 | 72.0% | 93.3% |
| 4kw3A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.72 | 66.0 | 5.06e-01 | 100.0% | 88.7% |
| 5xamA02 | 3.30.70.3220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 50.0 | 4.46e-01 | 70.3% | 54.0% |
| 4mt1A06 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.72 | 50.0 | 5.39e-01 | 71.2% | 100.0% |
| 6h8oA00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.72 | 52.0 | 5.70e-01 | 99.2% | 92.6% |
| 1ygyA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.72 | 46.0 | 5.46e-01 | 70.3% | 98.7% |
| 4oi3A00 | 3.30.70.3090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ORF SCO4226, nickel-binding ferredoxin-like monomer | 0.72 | 48.0 | 5.63e-01 | 74.6% | 100.0% |
| 2dt9A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.71 | 47.0 | 5.51e-01 | 70.3% | 100.0% |
| 1y7pB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.71 | 47.0 | 5.57e-01 | 70.3% | 100.0% |
| 1l2mA00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.71 | 58.0 | 5.89e-01 | 98.3% | 88.1% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 51.0 | 5.64e-01 | 75.4% | 95.7% |
| 3s1tA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 47.0 | 5.48e-01 | 70.3% | 100.0% |
| 1m55A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.70 | 65.0 | 5.43e-01 | 100.0% | 86.5% |
| 1j27A00 | 3.30.70.1120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TT1725-like | 0.70 | 49.0 | 5.32e-01 | 72.0% | 91.8% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.69 | 50.0 | 5.62e-01 | 80.5% | 98.9% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.68 | 47.0 | 4.91e-01 | 70.3% | 92.6% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.68 | 47.0 | 4.87e-01 | 71.2% | 88.4% |
| 3d3bJ00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.66 | 45.0 | 5.10e-01 | 71.2% | 94.3% |
| 2ausC02 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.66 | 47.0 | 3.99e-01 | 73.7% | 49.5% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 47.0 | 5.35e-01 | 100.0% | 100.0% |
| 1q5yC00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.65 | 43.0 | 5.03e-01 | 70.3% | 96.3% |
| 4ozjA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 45.0 | 4.76e-01 | 72.9% | 79.8% |
| 2apoA03 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 46.0 | 5.08e-01 | 72.9% | 95.7% |
| 3cedA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 44.0 | 4.81e-01 | 72.0% | 83.7% |
| 1r9wA00 | 3.40.1310.10 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.65 | 52.0 | 4.99e-01 | 98.3% | 73.9% |
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 45.0 | 5.10e-01 | 72.0% | 100.0% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 46.0 | 4.94e-01 | 73.7% | 100.0% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.64 | 29.0 | 3.85e-01 | 72.9% | 77.3% |
| 4er8A00 | 3.30.70.1290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like | 0.64 | 58.0 | 5.21e-01 | 100.0% | 78.8% |
| 5t0oA02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.64 | 52.0 | 5.51e-01 | 100.0% | 98.1% |
| 3m05B01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 45.0 | 5.03e-01 | 72.9% | 100.0% |
| 1q8bA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 45.0 | 4.89e-01 | 72.0% | 96.8% |
| 4dmzA02 | 3.30.70.2880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 49.0 | 4.72e-01 | 82.2% | 88.3% |
| 1pbuA00 | 3.30.70.1010 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Translation elongation factor EF1B, gamma chain, conserved domain | 0.63 | 57.0 | 5.16e-01 | 100.0% | 75.9% |
| 1gqeA02 | 3.30.70.1660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 43.0 | 4.06e-01 | 70.3% | 69.7% |
| 5k9fA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 44.0 | 4.67e-01 | 72.0% | 94.2% |
| 2pgcA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 44.0 | 4.65e-01 | 72.9% | 88.7% |
| 2rilA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 46.0 | 4.99e-01 | 76.3% | 97.9% |
| 1zbtA02 | 3.30.70.1660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 43.0 | 3.90e-01 | 71.2% | 62.6% |
| 2qrrA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 42.0 | 4.64e-01 | 72.9% | 84.5% |
| 2pgcC01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 43.0 | 4.66e-01 | 71.2% | 100.0% |
| 3kg0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 45.0 | 4.91e-01 | 76.3% | 99.0% |
| 4mt1A02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.62 | 50.0 | 5.29e-01 | 100.0% | 98.1% |
| 3bdeB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 44.0 | 4.69e-01 | 72.9% | 98.0% |
| 4zosB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 43.0 | 4.70e-01 | 73.7% | 100.0% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 38.0 | 4.55e-01 | 74.6% | 98.7% |
| 2nyhA00 | 3.30.70.1240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › DOPA-like domains | 0.61 | 43.0 | 4.35e-01 | 73.7% | 73.3% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 42.0 | 4.61e-01 | 72.0% | 100.0% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.61 | 43.0 | 4.69e-01 | 72.0% | 92.6% |
| 3rjaA02 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.61 | 54.0 | 4.35e-01 | 98.3% | 65.9% |
| 1o51A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 42.0 | 4.72e-01 | 72.0% | 95.5% |
| 4wiqA02 | 3.30.70.1040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dystroglycan, domain 2 | 0.60 | 45.0 | 4.50e-01 | 78.8% | 99.2% |
| 2qswA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 40.0 | 4.47e-01 | 70.3% | 87.8% |
| 2bvfA03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.60 | 55.0 | 4.51e-01 | 100.0% | 70.0% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 42.0 | 4.49e-01 | 72.9% | 97.0% |
| 2go8A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 38.0 | 4.52e-01 | 72.0% | 100.0% |
| 1iujA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 42.0 | 4.50e-01 | 73.7% | 99.0% |
| 2fiuA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 41.0 | 4.45e-01 | 70.3% | 98.9% |
| 3lo3A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 41.0 | 4.43e-01 | 70.3% | 100.0% |
| 1x7vA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 41.0 | 4.47e-01 | 72.9% | 94.9% |
| 2ogkD00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.59 | 41.0 | 3.87e-01 | 71.2% | 85.2% |
| 6hhnA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 40.0 | 4.39e-01 | 70.3% | 100.0% |
| 1r89A03 | 3.30.70.590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain | 0.58 | 52.0 | 5.01e-01 | 100.0% | 86.6% |
| 2govA01 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.58 | 51.0 | 4.54e-01 | 97.5% | 77.5% |
| 2ipiA02 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.57 | 50.0 | 4.03e-01 | 99.2% | 62.1% |
| 5o6uB00 | 3.30.70.2540 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-associated endoribonuclease Cas6/Csy4 | 0.57 | 49.0 | 4.35e-01 | 97.5% | 97.3% |
| 3popA02 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.57 | 50.0 | 4.01e-01 | 100.0% | 61.9% |
| 1ywhC03 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.57 | 30.0 | 3.42e-01 | 78.0% | 65.9% |
| 3mcsA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 50.0 | 4.18e-01 | 100.0% | 95.8% |
| 3f44A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 50.0 | 4.18e-01 | 100.0% | 96.2% |
| 5d79A03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.56 | 49.0 | 4.24e-01 | 98.3% | 66.3% |
| 3vteA03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.56 | 49.0 | 4.28e-01 | 99.2% | 68.6% |
| 4ud8A03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.55 | 49.0 | 4.26e-01 | 99.2% | 67.9% |
| 1ie0A00 | 3.30.1360.80 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) | 0.54 | 44.0 | 3.99e-01 | 94.9% | 66.0% |
| 1jyhA00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.52 | 45.0 | 4.15e-01 | 97.5% | 80.6% |
| 3kkfA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 42.0 | 4.41e-01 | 100.0% | 100.0% |
ECOD (92)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3289935 | 304.8.1.44 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › RepSA | 0.83 | 79.0 | 6.06e-01 | 100.0% | 85.8% |
| 4304749 | 304.8.1.81 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › REP_ORF2-G2P | 0.78 | 72.0 | 5.50e-01 | 100.0% | 51.9% |
| 5024024 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.77 | 54.0 | 5.96e-01 | 72.0% | 92.6% |
| 4133039 | 304.8.1.81 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › REP_ORF2-G2P | 0.76 | 70.0 | 6.21e-01 | 100.0% | 87.9% |
| 4936933 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.75 | 50.0 | 5.78e-01 | 72.0% | 94.1% |
| 4030911 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.74 | 50.0 | 5.83e-01 | 71.2% | 96.4% |
| 5052336 | 304.4.1.75 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › GYD | 0.74 | 53.0 | 5.83e-01 | 73.7% | 91.6% |
| 4959045 | 304.8.1.81 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › REP_ORF2-G2P | 0.74 | 68.0 | 6.27e-01 | 100.0% | 80.7% |
| 3415133 | 304.151.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase | 0.74 | 52.0 | 5.71e-01 | 72.0% | 98.9% |
| 162851 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.74 | 50.0 | 5.86e-01 | 73.7% | 100.0% |
| 5025196 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.73 | 48.0 | 5.61e-01 | 71.2% | 96.2% |
| 4932448 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.73 | 50.0 | 5.61e-01 | 70.3% | 100.0% |
| 2391478 | 304.55.1.5 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Viral_Rep | 0.72 | 52.0 | 5.70e-01 | 99.2% | 92.6% |
| 4991606 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.72 | 47.0 | 5.50e-01 | 70.3% | 96.2% |
| 3619851 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.72 | 50.0 | 5.65e-01 | 71.2% | 100.0% |
| 5033573 | 304.4.1.75 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › GYD | 0.72 | 51.0 | 5.60e-01 | 72.9% | 92.6% |
| 4105022 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.72 | 45.0 | 5.04e-01 | 72.0% | 82.2% |
| 3164010 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.72 | 48.0 | 5.67e-01 | 71.2% | 100.0% |
| 5043492 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.71 | 50.0 | 5.43e-01 | 72.9% | 91.9% |
| 3505041 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.71 | 50.0 | 5.16e-01 | 72.0% | 97.3% |
| 3454041 | 304.151.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase | 0.71 | 50.0 | 4.76e-01 | 72.0% | 74.1% |
| 3391210 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.70 | 52.0 | 5.39e-01 | 78.0% | 89.1% |
| 5026237 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.69 | 49.0 | 5.60e-01 | 72.9% | 100.0% |
| 3365659 | 304.8.1.1 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C | 0.69 | 50.0 | 5.60e-01 | 83.1% | 100.0% |
| 3733897 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.68 | 49.0 | 5.08e-01 | 73.7% | 88.9% |
| 4417915 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.68 | 45.0 | 5.04e-01 | 72.0% | 87.8% |
| 3392505 | 11.1.1.633 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › KIAA0319 | 0.67 | 48.0 | 4.77e-01 | 72.9% | 82.5% |
| 3716197 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.67 | 48.0 | 5.22e-01 | 74.6% | 93.0% |
| 3620481 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.67 | 47.0 | 5.34e-01 | 71.2% | 98.8% |
| 4012488 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.66 | 47.0 | 5.10e-01 | 72.9% | 95.8% |
| 4992428 | 304.20.1.4 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C | 0.66 | 52.0 | 4.36e-01 | 83.1% | 85.9% |
| 4173939 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.66 | 43.0 | 4.82e-01 | 72.0% | 85.6% |
| 4615209 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.66 | 44.0 | 4.87e-01 | 72.0% | 85.3% |
| 5031804 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.66 | 47.0 | 5.12e-01 | 72.9% | 92.6% |
| 4883269 | 304.51.1.5 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Csy4 | 0.66 | 46.0 | 5.06e-01 | 72.9% | 100.0% |
| 3730662 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.66 | 47.0 | 5.05e-01 | 74.6% | 98.0% |
| 4218099 | 304.55.1.1 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Gemini_AL1 | 0.65 | 58.0 | 5.61e-01 | 98.3% | 91.9% |
| 3185512 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.65 | 58.0 | 4.56e-01 | 100.0% | 58.5% |
| 4547137 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.64 | 42.0 | 4.80e-01 | 70.3% | 91.8% |
| 4299862 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.64 | 43.0 | 4.62e-01 | 72.9% | 80.0% |
| 3497180 | 304.46.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF1-gamma domain › eEF1-gamma domain › EF1G | 0.64 | 57.0 | 5.24e-01 | 99.2% | 93.5% |
| 3604508 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.64 | 43.0 | 4.83e-01 | 71.2% | 90.0% |
| 4370515 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.64 | 45.0 | 4.86e-01 | 72.9% | 94.0% |
| 3952578 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.64 | 58.0 | 4.57e-01 | 100.0% | 59.4% |
| 5053029 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.63 | 44.0 | 4.83e-01 | 72.0% | 100.0% |
| 3786175 | 304.46.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF1-gamma domain › eEF1-gamma domain › EF1G | 0.63 | 57.0 | 5.15e-01 | 100.0% | 92.0% |
| 3596967 | 304.46.1.0 ↗ | a+b two layers › Alpha-beta plaits › eEF1-gamma domain › eEF1-gamma domain | 0.63 | 57.0 | 5.16e-01 | 100.0% | 91.8% |
| 5052508 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.63 | 44.0 | 4.83e-01 | 71.2% | 92.5% |
| 4074612 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.63 | 41.0 | 4.52e-01 | 70.3% | 82.1% |
| 4030594 | 304.46.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF1-gamma domain › eEF1-gamma domain › EF1G | 0.63 | 56.0 | 5.09e-01 | 100.0% | 93.8% |
| 5059197 | 304.55.2.1 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › Y1_Tnp | 0.63 | 57.0 | 5.40e-01 | 100.0% | 92.1% |
| 5078835 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.62 | 56.0 | 4.42e-01 | 100.0% | 65.8% |
| 4611510 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.62 | 45.0 | 4.91e-01 | 79.7% | 94.7% |
| 4928686 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.61 | 44.0 | 4.97e-01 | 78.0% | 98.9% |
| 3931669 | 304.4.1.54 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Amnionless | 0.61 | 43.0 | 4.01e-01 | 72.0% | 76.0% |
| 5079012 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.61 | 42.0 | 3.96e-01 | 70.3% | 84.1% |
| 4018685 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.61 | 54.0 | 4.14e-01 | 100.0% | 53.6% |
| 4378266 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.61 | 55.0 | 4.29e-01 | 100.0% | 57.7% |
| 3721207 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.61 | 53.0 | 4.15e-01 | 99.2% | 53.3% |
| 3283902 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.61 | 54.0 | 4.18e-01 | 100.0% | 61.5% |
| 3728041 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.60 | 54.0 | 4.21e-01 | 100.0% | 55.4% |
| 3713162 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.60 | 53.0 | 3.99e-01 | 98.3% | 59.7% |
| 3181053 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.60 | 53.0 | 4.06e-01 | 100.0% | 55.1% |
| 3633444 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.60 | 53.0 | 4.14e-01 | 98.3% | 55.0% |
| 1698645 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.60 | 55.0 | 4.26e-01 | 100.0% | 58.3% |
| 4929092 | 304.4.1.9 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Chlor_dismutase | 0.60 | 42.0 | 4.21e-01 | 72.9% | 75.8% |
| 2605091 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.60 | 54.0 | 4.10e-01 | 100.0% | 54.8% |
| 3202539 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.60 | 53.0 | 4.14e-01 | 100.0% | 55.1% |
| 3291378 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.60 | 53.0 | 4.30e-01 | 100.0% | 57.4% |
| 4622719 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.60 | 53.0 | 4.27e-01 | 100.0% | 62.2% |
| 4219489 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.60 | 53.0 | 4.08e-01 | 99.2% | 53.8% |
| 4977616 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.59 | 41.0 | 4.04e-01 | 70.3% | 99.2% |
| 3727919 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.59 | 52.0 | 4.13e-01 | 100.0% | 55.0% |
| 3638202 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.59 | 51.0 | 4.23e-01 | 99.2% | 66.1% |
| 4017525 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.59 | 52.0 | 4.04e-01 | 100.0% | 61.1% |
| 4606373 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.59 | 52.0 | 4.06e-01 | 100.0% | 54.8% |
| 3945041 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.59 | 51.0 | 4.62e-01 | 97.5% | 98.8% |
| 3735140 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.59 | 51.0 | 4.04e-01 | 100.0% | 54.8% |
| 4151784 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.59 | 53.0 | 4.02e-01 | 99.2% | 55.6% |
| 3735269 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.58 | 50.0 | 3.98e-01 | 97.5% | 55.8% |
| 3494762 | 886.1.1.0 ↗ | a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain | 0.58 | 51.0 | 4.52e-01 | 97.5% | 76.5% |
| 3279592 | 304.4.1.14 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb | 0.58 | 40.0 | 3.92e-01 | 71.2% | 70.8% |
| 4011256 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.58 | 51.0 | 4.06e-01 | 100.0% | 58.0% |
| 4051078 | 304.4.1.71 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF4937 | 0.58 | 50.0 | 5.11e-01 | 98.3% | 100.0% |
| 5051665 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.58 | 52.0 | 4.23e-01 | 100.0% | 72.9% |
| 4944778 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.57 | 52.0 | 4.24e-01 | 100.0% | 75.0% |
| 4998285 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.57 | 39.0 | 3.67e-01 | 70.3% | 82.0% |
| 4075488 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.57 | 50.0 | 3.93e-01 | 100.0% | 56.3% |
| 5076457 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.57 | 39.0 | 3.68e-01 | 70.3% | 85.5% |
| 4013989 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.56 | 49.0 | 3.93e-01 | 99.2% | 56.2% |
| 5023895 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.56 | 38.0 | 3.60e-01 | 70.3% | 85.5% |
| 5055923 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 43.0 | 4.21e-01 | 83.1% | 87.2% |
D2
medium
residues 229-260