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replication-associated_protein
Euk-VirSida_yellow_blotch_virus
replication-associated_protein__YP_007438873__Sida_yellow_blotch_virus__1266993
Identity
- Accession:
- YP_007438873 ↗
- Protein ID:
- replication-associated_protein
- Kingdom:
- euk
Quality
82.1
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Begomovirus›
Sida_yellow_blotch_virus
TaxID: 1266993
Cluster
View cluster (491 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-114
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 197.7 | 5.50e-59 | 100.0% | 92.9% |
D2
high
residues 127-173
Domain cluster:
rep: replication_initiator_protein__YP_009241413__Deinbollia_mosaic_virus__1812308__D128-173
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 49.1 | 7.70e-13 | 100.0% | 43.9% |
D3
high
residues 186-339
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 64.0 | 1.80e-17 | 29.9% | 43.0% |